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Fendrr
Gene Detail
 Symbol
Name
ID
Fendrr
Foxf1 adjacent non-coding developmental regulatory RNA
MGI:1916040
BioType Conflict
Synonyms 1110050K14Rik, linc-Foxf1a
Feature Type lincRNA gene
Genetic Map
Chromosome 8
70.28 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr8:121054882-121083110 bp, - strand
From VEGA annotation of GRCm38

  28229 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Fendrr
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
 
Homozygous null mice for one allele display complete neonatal lethality with respiratory failure and pulmonary hypoplasia. Chimeric null mice display complete embryonic lethality during organogenesis, omphalocele and ventricle myocardium hypoplasia.
 
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process embryonic organ development, lateral mesoderm development, ...
Component nucleus
Function core promoter binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(3)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(3) cDNA(3)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000043019 (Evidence)
Ensembl Gene ModelENSMUSG00000097336 (Evidence)
Entrez Gene68790 (Evidence)
UniGene246916
DFCITC1600141, TC1613384
DoTSDT.91284259, DT.91335359
NIA Mouse Gene IndexU030335
International Mouse Knockout Project StatusFendrr
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000043019 VEGA Gene Model | MGI Sequence Detail 28229 C57BL/6J ±  kb
transcript OTTMUST00000116970 VEGA | MGI Sequence Detail 2410 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(1)
Polymorphisms SNPs within 2kb(81 from dbSNP Build 137)
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:204277 Sauvageau M, et al., Multiple knockout mouse models reveal lincRNAs are required for life and brain development. Elife. 2013;2(0):e01749
All references(14)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory