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Ms4a6d Gene Detail
Summary
  • Symbol
    Ms4a6d
  • Name
    membrane-spanning 4-domains, subfamily A, member 6D
  • Synonyms
    Ms4a11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916024
    NCBI Gene: 68774
  • Member of
    Ms4ac cluster
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:11586606-11604804 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 8.45 cM, cytoband B
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    176 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916024
protein coding gene Chr19:11586604-11604849 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0024852
protein coding gene Chr19:8464847-8478020 (-)
AKR/J MGP_AKRJ_G0024827
protein coding gene Chr19:8790402-8800134 (-)
BALB/cJ MGP_BALBcJ_G0024852
protein coding gene Chr19:8468734-8482529 (-)
C3H/HeJ MGP_C3HHeJ_G0024618
protein coding gene Chr19:8689270-8702810 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025300
protein coding gene Chr19:9428707-9439951 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022724
protein coding gene Chr19:8831351-8842564 (-)
CAST/EiJ MGP_CASTEiJ_G0024091
protein coding gene Chr19:8281059-8292477 (-)
CBA/J MGP_CBAJ_G0024592
protein coding gene Chr19:9486020-9497269 (-)
DBA/2J MGP_DBA2J_G0024719
protein coding gene Chr19:8434223-8449150 (-)
FVB/NJ MGP_FVBNJ_G0024686
protein coding gene Chr19:8471958-8484354 (-)
LP/J MGP_LPJ_G0024806
protein coding gene Chr19:8982535-8994576 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024713
protein coding gene Chr19:9382676-9395143 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025348
protein coding gene Chr19:8772372-8788708 (-)
PWK/PhJ MGP_PWKPhJ_G0023835
protein coding gene Chr19:7894404-7906065 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023641
protein coding gene Chr19:7932987-7944391 (-)
WSB/EiJ MGP_WSBEiJ_G0024153
protein coding gene Chr19:8626589-8638541 (-)



Homology
more
  • Human Ortholog
    MS4A6A, membrane spanning 4-domains A6A
  • Vertebrate Orthologs
    6
  • Human Ortholog
    MS4A6A, membrane spanning 4-domains A6A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    4SPAN3, 4SPAN3.2, CD20L3, CDA01, MS4A6, MST090, MSTP090
  • Links
    NCBI Gene ID: 64231
    neXtProt AC: NX_Q9H2W1
    UniProt: Q9H2W1

  • Chr Location
    11q12.2; chr11:60171607-60184666 (-)  GRCh38.p7

  • Human Ortholog
    MS4A6E, membrane spanning 4-domains A6E
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 245802
    neXtProt AC: NX_Q96DS6
    UniProt: Q96DS6

  • Chr Location
    11q12.2; chr11:60334882-60340968 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68774 NCBI Gene Model | MGI Sequence Detail 18199 C57BL/6J ±  kb
transcript NM_026835 RefSeq | MGI Sequence Detail 1401 C57BL/6  
polypeptide Q99N07 UniProt | EBI | MGI Sequence Detail 247 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 5
Other
Accession IDs
less
MGI:1927659, MGI:2147536
References
more
  • Summaries
    All 34
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:233118 Abdallah BM, et al., DLK1 is a novel regulator of bone mass that mediates estrogen deficiency-induced bone loss in mice. J Bone Miner Res. 2011 Jul;26(7):1457-71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory