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Tyw5 Gene Detail
Summary
  • Symbol
    Tyw5
  • Name
    tRNA-yW synthesizing protein 5
  • Synonyms
    1110034B05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915986
    NCBI Gene: 68736
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:57388235-57406674 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 28.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    153 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915986
protein coding gene Chr1:57388235-57407101 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016040
protein coding gene Chr1:57204429-57224876 (-)
A/J MGP_AJ_G0016023
protein coding gene Chr1:55210833-55229691 (-)
AKR/J MGP_AKRJ_G0015979
protein coding gene Chr1:56692245-56712978 (-)
BALB/cJ MGP_BALBcJ_G0015978
protein coding gene Chr1:55246177-55264985 (-)
C3H/HeJ MGP_C3HHeJ_G0015810
protein coding gene Chr1:56974563-56993475 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016431
protein coding gene Chr1:59571894-59590754 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014152
protein coding gene Chr1:51167668-51185825 (-)
CAST/EiJ MGP_CASTEiJ_G0015392
protein coding gene Chr1:56236362-56257532 (-)
CBA/J MGP_CBAJ_G0015782
protein coding gene Chr1:61277904-61298318 (-)
DBA/2J MGP_DBA2J_G0015883
protein coding gene Chr1:54622704-54642138 (-)
FVB/NJ MGP_FVBNJ_G0015885
protein coding gene Chr1:53951886-53971010 (-)
LP/J MGP_LPJ_G0015955
protein coding gene Chr1:58098107-58117079 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015905
protein coding gene Chr1:64325248-64345137 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016478
protein coding gene Chr1:56688086-56706942 (-)
PWK/PhJ MGP_PWKPhJ_G0015178
protein coding gene Chr1:53971520-53990717 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014959
protein coding gene Chr1:56260382-56279107 (-)
WSB/EiJ MGP_WSBEiJ_G0015455
protein coding gene Chr1:56363284-56383392 (-)



Homology
more
  • Human Ortholog
    TYW5, tRNA-yW synthesizing protein 5
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TYW5, tRNA-yW synthesizing protein 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C2orf60, hTYW5
  • Links
    NCBI Gene ID: 129450
    neXtProt AC: NX_A2RUC4
    UniProt: A2RUC4

  • Chr Location
    2q33.1; chr2:199928911-199955736 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    14
  • Chemically induced (other)
    1
  • Gene trapped
    11
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Tyw5
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68736 NCBI Gene Model | MGI Sequence Detail 18440 C57BL/6J ±  kb
transcript NM_001037742 RefSeq | MGI Sequence Detail 1448 C57BL/6  
polypeptide A2RSX7 UniProt | EBI | MGI Sequence Detail 315 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    Genomic 1
    cDNA 26

    Microarray probesets 1
References
more
  • Summaries
    All 31
    Gene Ontology 4
    Phenotypes 11
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory