About   Help   FAQ
1110032F04Rik
Gene Detail
 Symbol
Name
ID
1110032F04Rik
RIKEN cDNA 1110032F04 gene
MGI:1915975
Feature Type protein coding gene
Genetic Map
Chromosome 3
32.06 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:68869586-68872163 bp, + strand
From VEGA annotation of GRCm38

  2578 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:110165  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 western clawed frog

Gene Tree: 1110032F04Rik

Human
homologs
Human Homolog C3orf80, chromosome 3 open reading frame 80
NCBI Gene ID 401097
neXtProt AC  NX_F5H4A9
Human Chr (Location)  3q25.33; chr3:160225636-160228213 (+)  GRCh38
Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
1110032F04Rik interacts with 217 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(7)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000044906 (Evidence)
Ensembl Gene ModelENSMUSG00000046999 (Evidence)
Entrez Gene68725 (Evidence)
UniGene45741
DFCITC1600908
DoTSDT.40150706
NIA Mouse Gene IndexU003318
Consensus CDS ProjectCCDS50931.1
International Mouse Knockout Project Status1110032F04Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044906 VEGA Gene Model | MGI Sequence Detail 2578 C57BL/6J ±  kb
transcript OTTMUST00000118030 VEGA | MGI Sequence Detail 2578 Not Applicable 
polypeptide OTTMUSP00000065921 VEGA | MGI Sequence Detail 247 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(5 from dbSNP Build 137)
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(23)
Other
accession IDs
MGI:2139625

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/19/2014
MGI 5.19
The Jackson Laboratory