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1110032A03Rik
Gene Detail
Symbol

Name
ID
1110032A03Rik
RIKEN cDNA 1110032A03 gene
MGI:1915971
Synonyms
4930500N06Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
27.75 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:50762828-50775520 bp, - strand
From VEGA annotation of GRCm38

  12693 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11242  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 2 cattle; 1 dog; 1 chicken; 1 zebrafish

HCOP human homology predictions: C11orf1
Gene Tree: 1110032A03Rik

Human
homologs
C11orf1, chromosome 11 open reading frame 1
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 64776
neXtProt AC: NX_Q9H5F2

Human Chr (Location): 11q23.1; chr11:111879198-111884074 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(2) Targeted(2)
Interactions
1110032A03Rik interacts with 144 markers (Mir7-1, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component nucleoplasm, nucleus
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(10)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase LOC100494160    NEW 
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000042097 (Evidence)
Ensembl Gene Model ENSMUSG00000037971 (Evidence)
Entrez Gene 68721 (Evidence)
DFCI TC1734607, TC1590695, TC1626778, TC1576894
NIA Mouse Gene Index U030849, U133084
Consensus CDS Project CCDS23173.1
International Mouse Phenotyping Consortium Status 1110032A03Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042097 VEGA Gene Model | MGI Sequence Detail 12693 C57BL/6J ±  kb
transcript OTTMUST00000110408 VEGA | MGI Sequence Detail 1015 Not Applicable 
polypeptide OTTMUSP00000061582 VEGA | MGI Sequence Detail 182 Not Applicable 

For the selected sequences
All sequences(59) RefSeq(8) UniProt(3)
Polymorphisms
SNPs within 2kb(131 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR009524 Uncharacterised protein family UPF0686
References
(Earliest) J:74598 O'Brien KP, et al., Characterization of five novel human genes in the 11q13-q22 region. Biochem Biophys Res Commun. 2000 Jun 24;273(1):90-4
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)
Other
accession IDs
MGI:1922210

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory