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1110032A03Rik Gene Detail
Summary
  • Symbol
    1110032A03Rik
  • Name
    RIKEN cDNA 1110032A03 gene
  • Synonyms
    4930500N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915971
    NCBI Gene: 68721
  • Gene Overview
    MyGene.info: C11orf1
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:50762828-50771402 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 27.75 cM, cytoband B
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    108 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915971
protein coding gene Chr9:50762828-50775520 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034790
protein coding gene Chr9:49664838-49677910 (-)
A/J MGP_AJ_G0034771
protein coding gene Chr9:48150910-48163231 (-)
AKR/J MGP_AKRJ_G0034699
protein coding gene Chr9:49160338-49173061 (-)
BALB/cJ MGP_BALBcJ_G0034763
protein coding gene Chr9:47875136-47887533 (-)
C3H/HeJ MGP_C3HHeJ_G0034473
protein coding gene Chr9:49650437-49664975 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035283
protein coding gene Chr9:51048916-51062597 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032196
protein coding gene Chr9:47611210-47624088 (-)
CAST/EiJ MGP_CASTEiJ_G0033795
protein coding gene Chr9:49598775-49612056 (-)
CBA/J MGP_CBAJ_G0034445
protein coding gene Chr9:52854819-52868687 (-)
DBA/2J MGP_DBA2J_G0034604
protein coding gene Chr9:48009159-48021510 (-)
FVB/NJ MGP_FVBNJ_G0034545
protein coding gene Chr9:47224463-47236897 (-)
LP/J MGP_LPJ_G0034685
protein coding gene Chr9:50023707-50036743 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034588
protein coding gene Chr9:54450750-54464875 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035304
protein coding gene Chr9:49143166-49154918 (-)
PWK/PhJ MGP_PWKPhJ_G0033500
protein coding gene Chr9:47986851-47999629 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033335
protein coding gene Chr9:49447267-49460811 (-)
WSB/EiJ MGP_WSBEiJ_G0033908
protein coding gene Chr9:49145841-49158612 (-)



Homology
more
  • Human Ortholog
    C11orf1, chromosome 11 open reading frame 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    C11orf1, chromosome 11 open reading frame 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 64776
    neXtProt AC: NX_Q9H5F2
    UniProt: Q9H5F2

  • Chr Location
    11q23.1; chr11:111879190-111884083 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68721 NCBI Gene Model | MGI Sequence Detail 8575 C57BL/6J ±  kb
transcript NM_023483 RefSeq | MGI Sequence Detail 3285 C57BL/6  
polypeptide Q9D131 UniProt | EBI | MGI Sequence Detail 166 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR009524 Uncharacterised protein family UPF0686
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 2
Other
Accession IDs
less
MGI:1922210
References
more
  • Summaries
    All 29
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:74598 O'Brien KP, et al., Characterization of five novel human genes in the 11q13-q22 region. Biochem Biophys Res Commun. 2000 Jun 24;273(1):90-4
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory