About   Help   FAQ
Pga5
Gene Detail
 Symbol
Name
ID
Pga5
pepsinogen 5, group I
MGI:1915935
Synonyms 1110035E17Rik, Pepf, pepsinogen A5
Feature Type protein coding gene
Genetic Map
Chromosome 19
7.12 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:10668957-10678071 bp, - strand
From NCBI annotation of GRCm38

  9115 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:105932  Vertebrate Homology Class
1 mouse; 1 rat; 31 cattle; 1 dog

Protein SuperFamily: Pepsin
Gene Tree: Pga5

Alleles
and
phenotypes
All alleles(5) : Targeted(2) Gene trapped(3)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process protein metabolic process, proteolysis
Component cellular_component
Function aspartic-type endopeptidase activity, hydrolase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (63)    Tissues (37)   
Theiler Stages: 15, 19, 20, 21, 22, 23, 24, 25, 26, 28
Assay TypeResults
Immunohistochemistry 2
RNA in situ 11
Northern blot 48
Western blot 2
cDNA source data(15)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000024738 (Evidence)
Entrez Gene58803 (Evidence)
UniGene34037
DFCITC1585006
DoTSDT.528753
NIA Mouse Gene IndexU038809
Consensus CDS ProjectCCDS29584.1
International Mouse Knockout Project StatusPga5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 58803 NCBI Gene Model | MGI Sequence Detail 9115 C57BL/6J ±  kb
transcript NM_021453 RefSeq | MGI Sequence Detail 1416 C57BL/6 
polypeptide NP_067428 RefSeq | MGI Sequence Detail 387 C57BL/6 

For the selected sequences
All sequences(17) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(210 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR021109 Aspartic peptidase
InterPro IPR001461 Peptidase A1
InterPro IPR001969 Peptidase aspartic, active site
InterPro IPR012848 Propeptide, peptidase A1
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:201436 Chang I, et al., Endothelin-2 deficiency causes growth retardation, hypothermia, and emphysema in mice. J Clin Invest. 2013 Jun 3;123(6):2643-53
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
04/08/2014
MGI 5.17
The Jackson Laboratory