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Slc44a2 Gene Detail
Summary
  • Symbol
    Slc44a2
  • Name
    solute carrier family 44, member 2
  • Synonyms
    1110028E10Rik, CTL2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915932
    NCBI Gene: 68682
  • Gene Overview
    MyGene.info: SLC44A2
Location & Maps
more
  • Sequence Map
    Chr9:21337828-21355025 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      17198 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 7.77 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SLC44A2, solute carrier family 44 member 2
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SLC44A2, solute carrier family 44 member 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CTL2, PP1292
  • Links
    NCBI Gene ID: 57153
    neXtProt AC: NX_Q8IWA5

  • Chr Location
    19p13.1; chr19:10602445-10644559 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    13
  • Gene trapped
    10
  • Targeted
    3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057193 Ensembl Gene Model | MGI Sequence Detail 17198 C57BL/6J ±  kb
transcript ENSMUST00000034697 Ensembl | MGI Sequence Detail 3456 Not Applicable  
polypeptide ENSMUSP00000034697 Ensembl | MGI Sequence Detail 706 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    64 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000015144 choline transporter-like protein 2
  • InterPro Domains
    IPR007603 Choline transporter-like
Molecular
Reagents
less
  • All nucleic 15
    cDNA 14
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:193640 Lo JC, et al., RAB-like 2 has an essential role in male fertility, sperm intra-flagellar transport, and tail assembly. PLoS Genet. 2012;8(10):e1002969

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory