Nadk2 MGI Mouse Gene Detail - MGI:1915896 - NAD kinase 2, mitochondrial

Symbol

Nadk2
Name

NAD kinase 2, mitochondrial
Synonyms

1110020G09Rik, 4933430B08Rik, MNADK, Nadkd1

Feature Type

protein coding gene
IDs

MGI:1915896
NCBI Gene: 68646
Alliance

gene page
Transcription Start Sites

7 TSS

Sequence Map

Chr15:9071260-9110496 bp, + strand
From NCBI annotation of GRCm38

View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 15, 3.82 cM, cytoband A2
Mapping Data

2 experiments

SNPs within 2kb

107 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1915896	protein coding gene	Chr15:9071260-9110891 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0021710	protein coding gene	Chr15:6148766-6193637 (+)
A/J	MGP_AJ_G0021670	protein coding gene	Chr15:5983863-6027548 (+)
AKR/J	MGP_AKRJ_G0021648	protein coding gene	Chr15:6046344-6085725 (+)
BALB/cJ	MGP_BALBcJ_G0021677	protein coding gene	Chr15:5895256-5936230 (+)
C3H/HeJ	MGP_C3HHeJ_G0021453	protein coding gene	Chr15:6096335-6136936 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0022116	protein coding gene	Chr15:6359863-6405137 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0019653	protein coding gene	Chr15:5552579-5593453 (+)
CAST/EiJ	MGP_CASTEiJ_G0020969	protein coding gene	Chr15:6098027-6142810 (+)
CBA/J	MGP_CBAJ_G0021422	protein coding gene	Chr15:6507493-6548718 (+)
DBA/2J	MGP_DBA2J_G0021546	protein coding gene	Chr15:5869199-5908251 (+)
FVB/NJ	MGP_FVBNJ_G0021524	protein coding gene	Chr15:5791982-5834349 (+)
LP/J	MGP_LPJ_G0021614	protein coding gene	Chr15:6072936-6116019 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0021549	protein coding gene	Chr15:6749233-6797208 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0022139	protein coding gene	Chr15:6104431-6146433 (+)
PWK/PhJ	MGP_PWKPhJ_G0020712	protein coding gene	Chr15:5919941-5967557 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0020550	protein coding gene	Chr15:5975348-6020987 (+)
WSB/EiJ	MGP_WSBEiJ_G0021025	protein coding gene	Chr15:6036213-6077065 (+)

Human Ortholog

NADK2, NAD kinase 2, mitochondrial

Vertebrate Orthologs

10

Human Ortholog

NADK2, NAD kinase 2, mitochondrial
Orthology source: HomoloGene, HGNC
Synonyms

C5orf33, DECRD, MNADK, NADKD1
Links

HGNC:26404

NCBI Gene ID: 133686

neXtProt AC: NX_Q4G0N4

UniProt: Q4G0N4
Chr Location

5p13.2; chr5:36192589-36242279 (-) GRCh38.p7

HomoloGene

Vertebrate Homology Class 14638
1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
HCOP

human homology predictions: NADK2
Protein SuperFamily

kinase related to ATP-NAD kinase, eukaryotic type
Gene Tree

Nadk2

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Phenotype Summary

29 phenotypes from 3 alleles in 3 genetic backgrounds
10 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	immune system	integument	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	neoplasm	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	vision/eye

Click cells to view annotations.

All Mutations and Alleles

10
Endonuclease-mediated

1
Gene trapped

6
Targeted

3
Incidental Mutations

APF
Find Mice (IMSR)

17 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

Mice homozygous for knock-out allele exhibit increased serum lysine and carnitine levels, develop increased reactive oxygen species levels and hepatic steatosis on an atherogenic high-fat diet, and show impaired fasting-induced fatty acid oxidation.

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All GO Annotations

14
GO References

5

External Resources

FuncBase

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell death	cell differentiation	cell population proliferation	cellular component organization	establishment of localization	homeostatic process	immune system process	lipid metabolic process	nucleic acid-templated transcription	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

633
Tissues

1
cDNA Data

13
Literature Summary

1

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase nadk2

ZFIN nadk2

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Nadk2 interacts with 278 markers (Mir7-1, Mir7-2, Mir7b, ...) View All

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All Sequences

69
RefSeq

9
UniProt

5

Ensembl

ENSMUSG00000022253 (Evidence)
NCBI Gene

68646

			Length	Strain/Species	Flank
genomic	68646	NCBI Gene Model \| MGI Sequence Detail	39237	C57BL/6J	± kb
transcript	NM_001085410	RefSeq \| MGI Sequence Detail	3740	C57BL/6
polypeptide	Q8C5H8	UniProt \| EBI \| MGI Sequence Detail	452	Not Applicable

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UniProt

5 Sequences
Protein Ontology

PR:000029128 NAD kinase 2, mitochondrial

(term hierarchy)
EC

2.7.1.23
InterPro Domains

IPR017437 ATP-NAD kinase, PpnK-type, C-terminal

IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal

IPR002504 NAD kinase

IPR012355 NAD kinase 2, mitochondrial

IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily

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All nucleic 14

cDNA 13

Primer pair 1

Microarray probesets 7

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MGI:1918451

Summaries

All 37

Developmental Gene Expression 1

Gene Ontology 5

Phenotypes 10
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:267911 Timmermans S, et al., Overview of inactivating mutations in the protein-coding genome of the mouse reference strain C57BL/6J. JCI Insight. 2018 Jul 12;3(13)

TSS for Nadk2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr130610	Chr15:9071252-9071273 (+)	3 bp
Tssr130611	Chr15:9071289-9071304 (+)	37 bp
Tssr130612	Chr15:9071327-9071340 (+)	74 bp
Tssr130613	Chr15:9071393-9071471 (+)	172 bp
Tssr130614	Chr15:9071612-9071621 (+)	357 bp
Tssr130615	Chr15:9071624-9071635 (+)	370 bp
Tssr130616	Chr15:9071649-9071724 (+)	427 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer & Copyright Notice Send questions and comments to User Support.	last database update 01/12/2021 MGI 6.16