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1110012L19Rik
Gene Detail
Symbol

Name
ID
1110012L19Rik
RIKEN cDNA 1110012L19 gene
MGI:1915868
Feature Type
protein coding gene
Genetic Map
Chromosome X
36.02 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:70385877-70389417 bp, + strand
From VEGA annotation of GRCm38

  3541 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12274  Vertebrate Homology Class
2 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CXorf40A, CXorf40B
Gene Tree: 1110012L19Rik

Human
homologs
CXorf40A, chromosome X open reading frame 40A
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 91966
neXtProt AC: NX_Q8TE69

Human Synonyms: CXorf40, EOLA1

Human Chr (Location): Xq28; chrX:149540715-149555340 (+)  GRCh38.p2

  1 More Homolog(s):
Interactions
1110012L19Rik interacts with 66 markers (Mir18b, Mir19a, Mir19b-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (37)    Tissues (6)    Images (20)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 37
cDNA source data(40)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(40) cDNA(40)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000017762 (Evidence)
Ensembl Gene Model ENSMUSG00000045237 (Evidence)
Entrez Gene 68618 (Evidence)
UniGene 293255
DFCI TC1578950
DoTS DT.492661
NIA Mouse Gene Index U032134
Consensus CDS Project CCDS30174.1
International Mouse Phenotyping Consortium Status 1110012L19Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017762 VEGA Gene Model | MGI Sequence Detail 3541 C57BL/6J ±  kb
transcript OTTMUST00000043017 VEGA | MGI Sequence Detail 1094 Not Applicable 
polypeptide OTTMUSP00000019339 VEGA | MGI Sequence Detail 157 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(51 from dbSNP Build 137)    SNPs within 2kb including multiple locations(61)
Protein-related
information
ResourceIDDescription
InterPro IPR007374 ASCH domain
InterPro IPR015947 PUA-like domain
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(20)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory