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1110002L01Rik Gene Detail
Summary
  • Symbol
    1110002L01Rik
  • Name
    RIKEN cDNA 1110002L01 gene
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:1915821
    NCBI Gene: 100043040
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:3403883-3426747 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 1.79 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    63 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915821
antisense lncRNA gene Chr12:3403878-3427011 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003126
antisense lncRNA gene Chr12:196548-222583 (-)
A/J MGP_AJ_G0003103
antisense lncRNA gene Chr12:268998-294314 (-)
AKR/J MGP_AKRJ_G0003186
antisense lncRNA gene Chr14:17485746-17489749 (+)
BALB/cJ MGP_BALBcJ_G0003090
antisense lncRNA gene Chr12:268221-292878 (-)
C3H/HeJ MGP_C3HHeJ_G0003046
antisense lncRNA gene Chr12:170971-195815 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003233
antisense lncRNA gene Chr12:208632-232864 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002767
antisense lncRNA gene Chr12:201309-232837 (-)
CAST/EiJ MGP_CASTEiJ_G0003015
antisense lncRNA gene Chr12:228976-252460 (-)
CBA/J MGP_CBAJ_G0003043
antisense lncRNA gene Chr12:414392-443700 (-)
DBA/2J MGP_DBA2J_G0003048
antisense lncRNA gene Chr12:221880-247518 (-)
FVB/NJ MGP_FVBNJ_G0003068
antisense lncRNA gene Chr12:237684-261772 (-)
LP/J MGP_LPJ_G0003123
antisense lncRNA gene Chr12:215581-241886 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003057
antisense lncRNA gene Chr12:246544-267762 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003237
antisense lncRNA gene Chr12:171463-192467 (-)
PWK/PhJ MGP_PWKPhJ_G0002973
antisense lncRNA gene Chr12:229351-253189 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002917
antisense lncRNA gene Chr12:237325-262706 (-)
WSB/EiJ MGP_WSBEiJ_G0003046
antisense lncRNA gene Chr12:210125-236256 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043040 NCBI Gene Model | MGI Sequence Detail 22865 C57BL/6J ±  kb
transcript NR_030694 RefSeq | MGI Sequence Detail 3300 C57BL/6  
polypeptide Q8CBQ7 UniProt | EBI | MGI Sequence Detail 81 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/08/2019
MGI 6.13
The Jackson Laboratory