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Dpm3
Gene Detail
Symbol

Name
ID
Dpm3
dolichyl-phosphate mannosyltransferase polypeptide 3
MGI:1915813
Synonyms
1110001H19Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 3
39.03 cM, cytoband F2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr3:89259358-89267079 bp, + strand
From VEGA annotation of GRCm38

  7722 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17810  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

HCOP human homology predictions: DPM3
Gene Tree: Dpm3

Human
homologs
DPM3, dolichyl-phosphate mannosyltransferase polypeptide 3
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 54344
neXtProt AC: NX_Q9P2X0

Human Synonyms: CDG1O

Human Chr (Location): 1q22; chr1:155139891-155140520 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human DPM3

Mutations,
alleles, and
phenotypes
All mutations/alleles(20) : Gene trapped(18) Targeted(2)
Interactions
Dpm3 interacts with 7 markers (Mir20a, Mir155, Mir217, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (111)    Tissues (105)    Images (8)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 107
RT-PCR 4
cDNA source data(36)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase dpm3 ; ZFIN dpm3    NEW 
Molecular
reagents
All nucleic(38) cDNA(37) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000022265 (Evidence)
Ensembl Gene Model ENSMUSG00000042737 (Evidence)
Entrez Gene 68563 (Evidence)
UniGene 272927
DFCI TC1579207, TC1591928, TC1743354
DoTS DT.533392, DT.101407180, DT.94165313
NIA Mouse Gene Index U003462
Consensus CDS Project CCDS38487.1
International Mouse Phenotyping Consortium Status Dpm3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022265 VEGA Gene Model | MGI Sequence Detail 7722 C57BL/6J ±  kb
transcript OTTMUST00000053018 VEGA | MGI Sequence Detail 827 Not Applicable 
polypeptide OTTMUSP00000025186 VEGA | MGI Sequence Detail 92 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(4) UniProt(1)
Polymorphisms
SNPs within 2kb(14 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013174 Dolichol-phosphate mannosyltransferase subunit 3
Protein Ontology PR:000006658 dolichol-phosphate mannosyltransferase subunit 3
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(33)
Other
accession IDs
MGI:2139935

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory