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Smim14
Gene Detail
Symbol

Name
ID
Smim14
small integral membrane protein 14
MGI:1915802
Synonyms
1110003E01Rik, 1700127H04Rik, 5430439C17Rik, MAd4, MGC:7185
Feature Type
protein coding gene
Genetic Map
Chromosome 5
33.69 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr5:65446844-65537184 bp, - strand
From VEGA annotation of GRCm38

  90341 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:64466  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SMIM14
Gene Tree: Smim14

Human
homologs
SMIM14, small integral membrane protein 14
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 201895
neXtProt AC: NX_Q96QK8

Human Synonyms: C4orf34

Human Chr (Location): 4p14; chr4:39547297-39638861 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(202) : Gene trapped(199) Radiation induced(1) Targeted(2)
Genomic Mutations involving Smim14 (1)
Incidental mutations (data from CvDC )
Phenotype Images(4)
Interactions
Smim14 interacts with 290 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component endoplasmic reticulum, integral component of membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (189)    Tissues (23)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 189
cDNA source data(10)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase smim14    NEW 
Molecular
reagents
All nucleic(11) cDNA(11)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000028409 (Evidence)
Ensembl Gene Model ENSMUSG00000037822 (Evidence)
Entrez Gene 68552 (Evidence)
DFCI TC1574243, TC1617412, TC1632605
DoTS DT.101712463, DT.103583467, DT.494181, DT.91395109
NIA Mouse Gene Index U026245, U355916
Consensus CDS Project CCDS19309.1
International Mouse Phenotyping Consortium Status Smim14
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028409 VEGA Gene Model | MGI Sequence Detail 90341 C57BL/6J ±  kb
transcript OTTMUST00000070393 VEGA | MGI Sequence Detail 754 Not Applicable 
polypeptide OTTMUSP00000035869 VEGA | MGI Sequence Detail 99 Not Applicable 

For the selected sequences
All sequences(69) RefSeq(17) UniProt(3)
Polymorphisms
SNPs within 2kb(211 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020309 Uncharacterised protein family, CD034/YQF4
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173403 Goncalves L, et al., Identification and functional analysis of novel genes expressed in the Anterior Visceral Endoderm. Int J Dev Biol. 2011;55(3):281-95
All references(32)
Other
accession IDs
MGI:1915497, MGI:1918653

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory