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Tefm Gene Detail
Summary
  • Symbol
    Tefm
  • Name
    transcription elongation factor, mitochondrial
  • Synonyms
    1110002N22Rik, FLJ22729
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915800
    NCBI Gene: 68550
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:80136678-80142175 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 47.53 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915800
protein coding gene Chr11:80136674-80142724 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018806
protein coding gene Chr11:81281186-81287765 (-)
A/J MGP_AJ_G0018773
protein coding gene Chr11:78158858-78164385 (-)
AKR/J MGP_AKRJ_G0018743
protein coding gene Chr11:80505716-80511157 (-)
BALB/cJ MGP_BALBcJ_G0018746
protein coding gene Chr11:78547547-78553043 (-)
C3H/HeJ MGP_C3HHeJ_G0018560
protein coding gene Chr11:80553687-80559118 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019198
protein coding gene Chr11:83775388-83780844 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016832
protein coding gene Chr11:75090176-75096563 (-)
CAST/EiJ MGP_CASTEiJ_G0018115
protein coding gene Chr11:81036288-81046631 (-)
CBA/J MGP_CBAJ_G0018531
protein coding gene Chr11:87420776-87426262 (-)
DBA/2J MGP_DBA2J_G0018639
protein coding gene Chr11:77715385-77720859 (-)
FVB/NJ MGP_FVBNJ_G0018628
protein coding gene Chr11:77283567-77288980 (-)
LP/J MGP_LPJ_G0018709
protein coding gene Chr11:81799386-81805288 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018655
protein coding gene Chr11:87710390-87715882 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019238
protein coding gene Chr11:80755309-80760724 (-)
PWK/PhJ MGP_PWKPhJ_G0017885
protein coding gene Chr11:78518529-78528707 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017676
protein coding gene Chr11:80346349-80351743 (-)
WSB/EiJ MGP_WSBEiJ_G0018167
protein coding gene Chr11:80589540-80595028 (-)



Homology
more
  • Human Ortholog
    TEFM, transcription elongation factor, mitochondrial
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TEFM, transcription elongation factor, mitochondrial
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C17orf42
  • Links
    NCBI Gene ID: 79736
    neXtProt AC: NX_Q96QE5
    UniProt: Q96QE5

  • Chr Location
    17q11.2; chr17:30898983-30906775 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11657
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TEFM
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046909 Ensembl Gene Model | MGI Sequence Detail 5498 C57BL/6J ±  kb
transcript ENSMUST00000050207 Ensembl | MGI Sequence Detail 1309 Not Applicable  
polypeptide ENSMUSP00000059304 Ensembl | MGI Sequence Detail 364 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 30
    cDNA 30

    Microarray probesets 3
References
more
  • Summaries
    All 35
    Gene Ontology 2
    Phenotypes 15
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory