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1110007C09Rik
Gene Detail
Symbol

Name
ID
1110007C09Rik
RIKEN cDNA 1110007C09 gene
MGI:1915730
Feature Type
protein coding gene
Genetic Map
Chromosome 13
25.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr13:49202951-49216026 bp, - strand
From Ensembl annotation of GRCm38

  13076 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12269  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 chicken; 1 zebrafish

HCOP human homology predictions: C9orf89
Gene Tree: 1110007C09Rik

Human
homologs
C9orf89, chromosome 9 open reading frame 89
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 84270
neXtProt AC: NX_Q96LW7

Human Synonyms: bA370F5.1, BinCARD, CARD19

Human Chr (Location): 9q22.31; chr9:93096129-93113283 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
1110007C09Rik interacts with 60 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process regulation of apoptotic process
Component endoplasmic reticulum, integral component of membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(27)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: ZFIN si:ch211-243c14.4    NEW 
Molecular
reagents
All nucleic(27) cDNA(27)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000037960 (Evidence)
Entrez Gene 68480 (Evidence)
UniGene 3336
DFCI TC1581387, TC1589876, TC1608562
DoTS DT.101718465, DT.488750, DT.94121847
NIA Mouse Gene Index U034758
Consensus CDS Project CCDS49260.1
International Mouse Phenotyping Consortium Status 1110007C09Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037960 Ensembl Gene Model | MGI Sequence Detail 13076 C57BL/6J ±  kb
transcript ENSMUST00000048946 Ensembl | MGI Sequence Detail 804 Not Applicable 
polypeptide ENSMUSP00000047569 Ensembl | MGI Sequence Detail 183 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(12 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001315 CARD domain
InterPro IPR011029 Death-like domain
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(24)
Other
accession IDs
MGI:2145305

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory