About   Help   FAQ
Due to maintenance, access to MGI may be intermittent 8:00 AM ET Wed, September 18.
Sox6os Gene Detail
Summary
  • Symbol
    Sox6os
  • Name
    SRY (sex determining region Y)-box 6, opposite strand
  • Synonyms
    1110006G14Rik
Location &
Maps
more
  • Sequence Map
    Chr7:116031979-116032550 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 61.42 cM, cytoband F3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915719
antisense lncRNA gene Chr7:116031747-116032550 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004495
antisense lncRNA gene Chr7:119761857-119762428 (+)
A/J MGP_AJ_G0004475
antisense lncRNA gene Chr7:116744445-116745016 (+)
AKR/J MGP_AKRJ_G0004458
antisense lncRNA gene Chr7:119672919-119673493 (+)
BALB/cJ MGP_BALBcJ_G0004460
antisense lncRNA gene Chr7:116456264-116456838 (+)
C3H/HeJ MGP_C3HHeJ_G0004409
antisense lncRNA gene Chr7:119635764-119636335 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004610
antisense lncRNA gene Chr7:124554279-124554850 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004065
antisense lncRNA gene Chr7:118258197-118258774 (+)
CAST/EiJ MGP_CASTEiJ_G0004369
antisense lncRNA gene Chr7:111322704-111323275 (+)
CBA/J MGP_CBAJ_G0004404
antisense lncRNA gene Chr7:128658211-128658782 (+)
DBA/2J MGP_DBA2J_G0004418
antisense lncRNA gene Chr7:114801131-114801702 (+)
FVB/NJ MGP_FVBNJ_G0004435
antisense lncRNA gene Chr7:114641876-114642447 (+)
LP/J MGP_LPJ_G0004499
antisense lncRNA gene Chr7:121243247-121243818 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004424
antisense lncRNA gene Chr7:130265267-130265838 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004609
antisense lncRNA gene Chr7:118688865-118689436 (+)
PWK/PhJ MGP_PWKPhJ_G0004322
antisense lncRNA gene Chr7:107675499-107676070 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004263
antisense lncRNA gene Chr7:105405995-105406566 (+)
WSB/EiJ MGP_WSBEiJ_G0004408
antisense lncRNA gene Chr7:119561376-119561950 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030664 Ensembl Gene Model | MGI Sequence Detail 572 C57BL/6J ±  kb
transcript ENSMUST00000032900 Ensembl | MGI Sequence Detail 420 Not Applicable  
polypeptide Q9CTI5 UniProt | EBI | MGI Sequence Detail 104 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:61682 Hagiwara N, et al., Sox6 is a candidate gene for p100H myopathy, heart block, and sudden neonatal death. Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):4180-5
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/10/2019
MGI 6.14
The Jackson Laboratory