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Slc39a13
Gene Detail
 Symbol
Name
ID
Slc39a13
solute carrier family 39 (metal ion transporter), member 13
MGI:1915677
Synonyms 1100001L14Rik, ZIP13
Feature Type protein coding gene
Genetic Map
Chromosome 2
50.44 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:91061791-91070417 bp, - strand
From VEGA annotation of GRCm38

  8627 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:62681  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Slc39a13

Human
homologs
Human Homolog SLC39A13, solute carrier family 39 (zinc transporter), member 13
NCBI Gene ID 91252
neXtProt AC  NX_Q96H72
Human Chr (Location)  11p11.2; chr11:47407132-47416500 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human SLC39A13
Alleles
and
phenotypes
All alleles(7) : Gene trapped(4) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for disruption of this gene display skeletal abnormalities and dental abnormalities.
 
Human Diseases Modeled Using Mouse Slc39a13 (1)    Alleles Annotated to Human Diseases(1)    Phenotype Images(2)
Gene Ontology
(GO)
classifications
All GO classifications: (23 annotations)
Process cellular zinc ion homeostasis, connective tissue development, ...
Component Golgi apparatus, integral component of membrane, ...
Function metal ion transmembrane transporter activity, protein homodimerization activity, ...
External Resources: FuncBase
Expression
cDNA source data(45)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(45) cDNA(45)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000014353 (Evidence)
Ensembl Gene ModelENSMUSG00000002105 (Evidence)
Entrez Gene68427 (Evidence)
UniGene192375
DFCITC1576423, TC1590835, TC1596672, TC1649173
DoTSDT.40143219, DT.489402, DT.97352580, DT.99854084
NIA Mouse Gene IndexU023016
Consensus CDS ProjectCCDS16424.1, CCDS71095.1
International Mouse Knockout Project StatusSlc39a13
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014353 VEGA Gene Model | MGI Sequence Detail 8627 C57BL/6J ±  kb
transcript OTTMUST00000084164 VEGA | MGI Sequence Detail 1291 Not Applicable 
polypeptide OTTMUSP00000045319 VEGA | MGI Sequence Detail 374 Not Applicable 

For the selected sequences
All sequences(73) RefSeq(17) UniProt(3)
Polymorphisms SNPs within 2kb(24 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR003689 Zinc/iron permease
Protein Ontology PR:000015127 zinc transporter ZIP13
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:143911 Fukada T, et al., The zinc transporter SLC39A13/ZIP13 is required for connective tissue development; its involvement in BMP/TGF-beta signaling pathways. PLoS ONE. 2008;3(11):e3642
All references(34)
Other
accession IDs
MGI:3035256

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory