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Ccdc17 Gene Detail
Summary
  • Symbol
    Ccdc17
  • Name
    coiled-coil domain containing 17
  • Synonyms
    1100001F07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915667
    NCBI Gene: 622665
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:116453927-116457463 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 53.24 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915667
 protein coding gene Chr4:116453851-116457463 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028628
 protein coding gene Chr4:117500557-117504169 (+)
A/J MGP_AJ_G0028589
 protein coding gene Chr4:112995540-112999152 (+)
AKR/J MGP_AKRJ_G0028539
 protein coding gene Chr4:115436928-115440540 (+)
BALB/cJ MGP_BALBcJ_G0028610
 protein coding gene Chr4:113620744-113624356 (+)
C3H/HeJ MGP_C3HHeJ_G0028324
 protein coding gene Chr4:117007338-117010950 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029051
 protein coding gene Chr4:122043859-122047471 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026335
 protein coding gene Chr4:107031867-107035470 (+)
CAST/EiJ MGP_CASTEiJ_G0027758
 protein coding gene Chr4:114234423-114238036 (+)
CBA/J MGP_CBAJ_G0028291
 protein coding gene Chr4:125352155-125355767 (+)
DBA/2J MGP_DBA2J_G0028439
 protein coding gene Chr4:113626042-113629654 (+)
FVB/NJ MGP_FVBNJ_G0028407
 protein coding gene Chr4:112127280-112130892 (+)
LP/J MGP_LPJ_G0028541
 protein coding gene Chr4:117706658-117710270 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028434
 protein coding gene Chr4:130343447-130347059 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029088
 protein coding gene Chr4:116583839-116587451 (+)
PWK/PhJ MGP_PWKPhJ_G0027484
 protein coding gene Chr4:110403293-110406902 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027307
 protein coding gene Chr4:112859037-112862643 (+)
WSB/EiJ MGP_WSBEiJ_G0027837
 protein coding gene Chr4:116462307-116465919 (+)



Homology
more
  • Human Ortholog
    CCDC17, coiled-coil domain containing 17
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC17, coiled-coil domain containing 17
  • Links
    NCBI Gene ID: 149483
    neXtProt AC: NX_Q96LX7
    UniProt: Q96LX7

  • Chr Location
    1p34.1; chr1:45620044-45624057 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human CCDC17 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 622665 NCBI Gene Model | MGI Sequence Detail 3537 C57BL/6J ±  kb
transcript NM_001037916 RefSeq | MGI Sequence Detail 2003 C57BL/6  
polypeptide Q8CE13 UniProt | EBI | MGI Sequence Detail 565 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory