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Ccdc17 Gene Detail
Summary
  • Symbol
    Ccdc17
  • Name
    coiled-coil domain containing 17
  • Synonyms
    1100001F07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915667
    NCBI Gene: 622665
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:116596730-116600266 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 53.24 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915667
protein coding gene Chr4:116596654-116600266 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028628
protein coding gene Chr4:117500557-117504169 (+)
A/J MGP_AJ_G0028589
protein coding gene Chr4:112995540-112999152 (+)
AKR/J MGP_AKRJ_G0028539
protein coding gene Chr4:115436928-115440540 (+)
BALB/cJ MGP_BALBcJ_G0028610
protein coding gene Chr4:113620744-113624356 (+)
C3H/HeJ MGP_C3HHeJ_G0028324
protein coding gene Chr4:117007338-117010950 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029051
protein coding gene Chr4:122043859-122047471 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026335
protein coding gene Chr4:107031867-107035470 (+)
CAST/EiJ MGP_CASTEiJ_G0027758
protein coding gene Chr4:114234423-114238036 (+)
CBA/J MGP_CBAJ_G0028291
protein coding gene Chr4:125352155-125355767 (+)
DBA/2J MGP_DBA2J_G0028439
protein coding gene Chr4:113626042-113629654 (+)
FVB/NJ MGP_FVBNJ_G0028407
protein coding gene Chr4:112127280-112130892 (+)
LP/J MGP_LPJ_G0028541
protein coding gene Chr4:117706658-117710270 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028434
protein coding gene Chr4:130343447-130347059 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029088
protein coding gene Chr4:116583839-116587451 (+)
PWK/PhJ MGP_PWKPhJ_G0027484
protein coding gene Chr4:110403293-110406902 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027307
protein coding gene Chr4:112859037-112862643 (+)
WSB/EiJ MGP_WSBEiJ_G0027837
protein coding gene Chr4:116462307-116465919 (+)



Homology
more
  • Human Ortholog
    CCDC17, coiled-coil domain containing 17
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC17, coiled-coil domain containing 17
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 149483
    neXtProt AC: NX_Q96LX7
    UniProt: Q96LX7

  • Chr Location
    1p34.1; chr1:45620044-45624787 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 622665 NCBI Gene Model | MGI Sequence Detail 3537 C57BL/6J ±  kb
transcript NM_001037916 RefSeq | MGI Sequence Detail 2003 C57BL/6  
polypeptide Q8CE13 UniProt | EBI | MGI Sequence Detail 565 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 27
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/13/2020
MGI 6.16
The Jackson Laboratory