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Ccdc17 Gene Detail
Summary
  • Symbol
    Ccdc17
  • Name
    coiled-coil domain containing 17
  • Synonyms
    1100001F07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915667
    NCBI Gene: 622665
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:116596730-116600266 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 53.24 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915667
protein coding gene Chr4:116596654-116600266 (.)
129S1/SvImJ MGP_129S1SvImJ_G0028628
protein coding gene Chr4:117500557-117504169 (+)
A/J MGP_AJ_G0028589
protein coding gene Chr4:112995540-112999152 (+)
AKR/J MGP_AKRJ_G0028539
protein coding gene Chr4:115436928-115440540 (+)
BALB/cJ MGP_BALBcJ_G0028610
protein coding gene Chr4:113620744-113624356 (+)
C3H/HeJ MGP_C3HHeJ_G0028324
protein coding gene Chr4:117007338-117010950 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029051
protein coding gene Chr4:122043859-122047471 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026335
protein coding gene Chr4:107031867-107035470 (+)
CAST/EiJ MGP_CASTEiJ_G0027758
protein coding gene Chr4:114234423-114238036 (+)
CBA/J MGP_CBAJ_G0028291
protein coding gene Chr4:125352155-125355767 (+)
DBA/2J MGP_DBA2J_G0028439
protein coding gene Chr4:113626042-113629654 (+)
FVB/NJ MGP_FVBNJ_G0028407
protein coding gene Chr4:112127280-112130892 (+)
LP/J MGP_LPJ_G0028541
protein coding gene Chr4:117706658-117710270 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028434
protein coding gene Chr4:130343447-130347059 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029088
protein coding gene Chr4:116583839-116587451 (+)
PWK/PhJ MGP_PWKPhJ_G0027484
protein coding gene Chr4:110403293-110406902 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027307
protein coding gene Chr4:112859037-112862643 (+)
WSB/EiJ MGP_WSBEiJ_G0027837
protein coding gene Chr4:116462307-116465919 (+)



Homology
more
  • Human Ortholog
    CCDC17, coiled-coil domain containing 17
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC17, coiled-coil domain containing 17
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 149483
    neXtProt AC: NX_Q96LX7
    UniProt: Q96LX7

  • Chr Location
    1p34.1; chr1:45620044-45624787 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 622665 NCBI Gene Model | MGI Sequence Detail 3537 C57BL/6J ±  kb
transcript NM_001037916 RefSeq | MGI Sequence Detail 2003 C57BL/6  
polypeptide Q8CE13 UniProt | EBI | MGI Sequence Detail 565 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 27
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory