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Ccdc163
Gene Detail
 Symbol
Name
ID
Ccdc163
coiled-coil domain containing 163
MGI:1915644
Synonyms 0610037D15Rik, 4933430J04Rik
Feature Type protein coding gene
Genetic Map
Chromosome 4
53.29 cM, cytoband C7
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:116708509-116751206 bp, + strand
From VEGA annotation of GRCm38

  42698 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12265  Vertebrate Homology Class
1 mouse; 1 rat; 1 chimpanzee; 1 dog

Gene Tree: Ccdc163

Mutations,
alleles, and
phenotypes
All mutations/alleles(14) : Gene trapped(12) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ccdc163 interacts with 86 markers (Mir22, Mir23a, Mir24-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (29)    Tissues (29)    Images (8)
Theiler Stages: 19, 23, 28
Assay TypeResults
RNA in situ 29
cDNA source data(21)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(21) cDNA(21)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000009569 (Evidence)
Ensembl Gene ModelENSMUSG00000028689 (Evidence)
Entrez Gene68394 (Evidence)
UniGene425201
DFCITC1583839, TC1605437, TC1620260, TC1625468
DoTSDT.101371031, DT.101724391, DT.482049, DT.485901, DT.94121595
Consensus CDS ProjectCCDS38853.1
International Mouse Knockout Project StatusCcdc163
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009569 VEGA Gene Model | MGI Sequence Detail 42698 C57BL/6J ±  kb
transcript OTTMUST00000021941 VEGA | MGI Sequence Detail 1159 Not Applicable 
polypeptide OTTMUSP00000010007 VEGA | MGI Sequence Detail 326 Not Applicable 

For the selected sequences
All sequences(106) RefSeq(29) UniProt(9)
Polymorphisms SNPs within 2kb(299 from dbSNP Build 137)
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)
Other
accession IDs
MGI:1918510

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory