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0610025J13Rik Gene Detail
Summary
  • Symbol
    0610025J13Rik
  • Name
    RIKEN cDNA 0610025J13 gene
  • Synonyms
    B430316H17Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915618
    NCBI Gene: 78687
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:98209635-98220028 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 4, 45.60 cM, cytoband C6
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    130 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915618
lncRNA gene Chr4:98209593-98220197 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003919
antisense lncRNA gene Chr4:98474005-98484333 (+)
A/J MGP_AJ_G0003899
antisense lncRNA gene Chr4:95045330-95055747 (+)
AKR/J MGP_AKRJ_G0003876
antisense lncRNA gene Chr4:97357324-97367707 (+)
BALB/cJ MGP_BALBcJ_G0003885
antisense lncRNA gene Chr4:95299612-95310005 (+)
C3H/HeJ MGP_C3HHeJ_G0003832
antisense lncRNA gene Chr4:98151101-98161519 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004033
antisense lncRNA gene Chr4:102246884-102258590 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003523
antisense lncRNA gene Chr4:90446745-90457246 (+)
CAST/EiJ MGP_CASTEiJ_G0003796
antisense lncRNA gene Chr4:95946333-95956588 (+)
CBA/J MGP_CBAJ_G0003825
antisense lncRNA gene Chr4:105322898-105333290 (+)
DBA/2J MGP_DBA2J_G0003842
antisense lncRNA gene Chr4:94811136-94821452 (+)
FVB/NJ MGP_FVBNJ_G0003860
antisense lncRNA gene Chr4:93661161-93671598 (+)
LP/J MGP_LPJ_G0003921
antisense lncRNA gene Chr4:98789586-98799854 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003848
antisense lncRNA gene Chr4:111111346-111121666 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004028
antisense lncRNA gene Chr4:97606881-97617189 (+)
PWK/PhJ MGP_PWKPhJ_G0003751
antisense lncRNA gene Chr4:92955445-92965659 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003697
antisense lncRNA gene Chr4:95061053-95070110 (+)
WSB/EiJ MGP_WSBEiJ_G0003831
antisense lncRNA gene Chr4:97729738-97739976 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving 0610025J13Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046683 Ensembl Gene Model | MGI Sequence Detail 10394 C57BL/6J ±  kb
transcript ENSMUST00000180374 Ensembl | MGI Sequence Detail 713 Not Applicable  
polypeptide Q9CTM8 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    Genomic 2
    cDNA 2

    Microarray probesets 1
Other
Accession IDs
less
MGI:1925937
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory