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Ift20
Gene Detail
 Symbol
Name
ID
Ift20
intraflagellar transport 20
MGI:1915585
Synonyms 0610009H04Rik
Feature Type protein coding gene
Genetic Map
Chromosome 11
46.74 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr11:78536361-78541737 bp, + strand
From VEGA annotation of GRCm38

  5377 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49559  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Ift20

Human
homologs
Human Homolog IFT20, intraflagellar transport 20
NCBI Gene ID 90410
neXtProt AC  NX_Q8IY31
Human Chr (Location)  17q11.2; chr17:28328325-28335489 (-)  GRCh38
Alleles
and
phenotypes
All alleles(9) : Gene trapped(3) Targeted(6)
 
Mice homozygous for a null mutation die before birth. Mice with conditional loss in renal collecting ducts lack primary cilia and develop renal cysts.
 
Gene Ontology
(GO)
classifications
All GO classifications: (51 annotations)
Process cardiac muscle cell differentiation, cell projection organization, ...
Component cell, cell projection, ...
Function opsin binding, protein binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
cDNA source data(114)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(114) cDNA(114)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000000139 (Evidence)
Ensembl Gene ModelENSMUSG00000001105 (Evidence)
Entrez Gene55978 (Evidence)
UniGene358671
DFCITC1574938, TC1582974, TC1585772, TC1658232
DoTSDT.101377179, DT.110536989, DT.94342810, DT.94342829
NIA Mouse Gene IndexU013024
Consensus CDS ProjectCCDS25111.1
International Mouse Knockout Project StatusIft20
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000139 VEGA Gene Model | MGI Sequence Detail 5377 C57BL/6J ±  kb
transcript OTTMUST00000000451 VEGA | MGI Sequence Detail 582 Not Applicable 
polypeptide OTTMUSP00000000194 VEGA | MGI Sequence Detail 132 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(21 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000008934 intraflagellar transport protein 20
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:205308 Ma M, et al., Loss of cilia suppresses cyst growth in genetic models of autosomal dominant polycystic kidney disease. Nat Genet. 2013 Sep;45(9):1004-12
All references(55)
Other
accession IDs
MGI:2144373

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory