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Obfc1 Gene Detail
Summary
  • Symbol
    Obfc1
  • Name
    oligonucleotide/oligosaccharide-binding fold containing 1
  • Synonyms
    0610009H20Rik, 2310057J23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915581
    NCBI Gene: 108689
Location & Maps
more
  • Sequence Map
    Chr19:47501033-47537507 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      36475 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 39.64 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    STN1, STN1, CST complex subunit
  • Vertebrate Orthologs
    10
  • Human Ortholog
    STN1, STN1, CST complex subunit
    Orthology source: HomoloGene, HGNC
  • Synonyms
    AAF44, AAF-44, bA541N10.2, OBFC1, RPA-32
  • Links
    NCBI Gene ID: 79991
    neXtProt AC: NX_Q9H668

  • Chr Location
    10q24.33; chr10:103870258-103918287 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    9
  • Gene trapped
    9
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000043314 VEGA Gene Model | MGI Sequence Detail 36475 C57BL/6J ±  kb
transcript OTTMUST00000113650 VEGA | MGI Sequence Detail 1992 Not Applicable  
polypeptide OTTMUSP00000063514 VEGA | MGI Sequence Detail 378 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    358 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 4
Other
Accession IDs
less
MGI:1916898, MGI:2147515
References
more
  • Summaries
    All 27
    Gene Ontology 6
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:159131 Casteel DE, et al., A DNA polymerase-{alpha}{middle dot}primase cofactor with homology to replication protein A-32 regulates DNA replication in mammalian cells. J Biol Chem. 2009 Feb 27;284(9):5807-18

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory