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Yipf1
Gene Detail
Symbol

Name
ID
Yipf1
Yip1 domain family, member 1
MGI:1915532
Synonyms
C030002N13Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 4
50.18 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:107314363-107359823 bp, + strand
From VEGA annotation of GRCm38

  45461 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Protein SuperFamily: Yip5
Gene Tree: Yipf1
Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(6) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Yipf1 interacts with 37 markers (Mir20a, Mir30a, Mir30d, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(59)
External Resources: Allen Institute   Expression Atlas
Molecular
reagents
All nucleic(59) cDNA(59)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000008802 (Evidence)
Ensembl Gene ModelENSMUSG00000057375 (Evidence)
Entrez Gene230584, 102633565
UniGene29118
DFCITC1627541, TC1607625, TC1576202
DoTSDT.101721539, DT.492557, DT.94276256
NIA Mouse Gene IndexU004602
Consensus CDS ProjectCCDS18437.1
International Mouse Knockout Project StatusYipf1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000008802 VEGA Gene Model | MGI Sequence Detail 45461 C57BL/6J ±  kb
transcript OTTMUST00000020016 VEGA | MGI Sequence Detail 1321 Not Applicable 
polypeptide OTTMUSP00000009184 VEGA | MGI Sequence Detail 306 Not Applicable 

For the selected sequences
All sequences(56) UniProt(7)
Polymorphisms
SNPs within 2kb(438 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006977 Yip1 domain
Protein Ontology PR:000017531 protein YIPF1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory