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Agpat4
Gene Detail
Symbol

Name
ID
Agpat4
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
MGI:1915512
Synonyms
1500003P24Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 17
8.33 cM, cytoband A2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr17:12118704-12219645 bp, + strand
From VEGA annotation of GRCm38

  100942 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:69293  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like protein
Gene Tree: Agpat4

Human
homologs
Human Homolog AGPAT4, 1-acylglycerol-3-phosphate O-acyltransferase 4
NCBI Gene ID 56895
neXtProt AC  NX_Q9NRZ5
Human Synonyms  1-AGPAT4, dJ473J16.2, LPAAT-delta
Human Chr (Location)  6q26; chr6:161130025-161274075 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(45) : Gene trapped(43) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Agpat4 interacts with 167 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process lipid metabolic process, metabolic process, ...
Component integral component of membrane, membrane
Function 1-acylglycerol-3-phosphate O-acyltransferase activity, transferase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(45)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(46) cDNA(45) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000036581 (Evidence)
Ensembl Gene ModelENSMUSG00000023827 (Evidence)
Entrez Gene68262 (Evidence)
UniGene258300
DFCITC1606684, TC1579629
DoTSDT.50317157
NIA Mouse Gene IndexU017492
EC2.3.1.51
Consensus CDS ProjectCCDS28389.1
International Mouse Knockout Project StatusAgpat4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036581 VEGA Gene Model | MGI Sequence Detail 100942 C57BL/6J ±  kb
transcript OTTMUST00000093805 VEGA | MGI Sequence Detail 1915 Not Applicable 
polypeptide OTTMUSP00000052122 VEGA | MGI Sequence Detail 378 Not Applicable 

For the selected sequences
All sequences(49) RefSeq(10) UniProt(7)
Polymorphisms
SNPs within 2kb(791 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002123 Phospholipid/glycerol acyltransferase
Protein Ontology PR:000003837 1-acyl-sn-glycerol-3-phosphate acyltransferase delta
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory