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Babam1 Gene Detail
Summary
  • Symbol
    Babam1
  • Name
    BRISC and BRCA1 A complex member 1
  • Synonyms
    5430437P03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915501
    NCBI Gene: 68251
  • Gene Overview
    MyGene.info: BABAM1
Location & Maps
more
  • Sequence Map
    Chr8:71396855-71404772 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7918 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 34.43 cM, cytoband C1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    BABAM1, BRISC and BRCA1 A complex member 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    BABAM1, BRISC and BRCA1 A complex member 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C19orf62, HSPC142, MERIT40, NBA1
  • Links
    NCBI Gene ID: 29086
    neXtProt AC: NX_Q9NWV8

  • Chr Location
    19p13.11; chr19:17267376-17279353 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Gene trapped
    7
  • Targeted
    2
  • Genomic Mutations
    1 involving Babam1
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031820 Ensembl Gene Model | MGI Sequence Detail 7918 C57BL/6J ±  kb
transcript ENSMUST00000002473 Ensembl | MGI Sequence Detail 1592 Not Applicable  
polypeptide ENSMUSP00000002473 Ensembl | MGI Sequence Detail 333 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    79 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000010328 BRISC and BRCA1-A complex member 1
  • InterPro Domains
    IPR026126 BRISC and BRCA1-A complex member 1
    IPR002035 von Willebrand factor, type A
Molecular
Reagents
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  • All nucleic 122
    cDNA 122

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory