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Arl9 Gene Detail
Summary
  • Symbol
    Arl9
  • Name
    ADP-ribosylation factor-like 9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915496
    NCBI Gene: 384185
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:77004055-77010606 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 41.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915496
protein coding gene Chr5:77002271-77010959 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029652
protein coding gene Chr5:77220822-77227374 (+)
A/J MGP_AJ_G0029620
protein coding gene Chr5:74267177-74273718 (+)
AKR/J MGP_AKRJ_G0029568
protein coding gene Chr5:76690496-76697021 (+)
BALB/cJ MGP_BALBcJ_G0029629
protein coding gene Chr5:75003455-75009998 (+)
C3H/HeJ MGP_C3HHeJ_G0029352
protein coding gene Chr5:77064126-77070656 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030083
protein coding gene Chr5:80311746-80318288 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027324
protein coding gene Chr5:69897804-69903424 (+)
CAST/EiJ MGP_CASTEiJ_G0028760
protein coding gene Chr5:76272694-76279332 (+)
CBA/J MGP_CBAJ_G0029321
protein coding gene Chr5:82954548-82961080 (+)
DBA/2J MGP_DBA2J_G0029466
protein coding gene Chr5:74332001-74338531 (+)
FVB/NJ MGP_FVBNJ_G0029427
protein coding gene Chr5:73527920-73534386 (+)
LP/J MGP_LPJ_G0029553
protein coding gene Chr5:77657944-77664487 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029455
protein coding gene Chr5:86085058-86091681 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030116
protein coding gene Chr5:76242528-76249076 (+)
PWK/PhJ MGP_PWKPhJ_G0028483
protein coding gene Chr5:73344762-73351211 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028318
protein coding gene Chr5:75598674-75605266 (+)
WSB/EiJ MGP_WSBEiJ_G0028840
protein coding gene Chr5:76573087-76579617 (+)



Homology
more
  • Human Ortholog
    ARL9, ADP ribosylation factor like GTPase 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ARL9, ADP ribosylation factor like GTPase 9
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 132946
    neXtProt AC: NX_Q6T311
    UniProt: Q6T311

  • Chr Location
    4q12; chr4:56505209-56525174 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 66207
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ARL9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063820 Ensembl Gene Model | MGI Sequence Detail 6552 C57BL/6J ±  kb
transcript ENSMUST00000134197 Ensembl | MGI Sequence Detail 534 Not Applicable  
polypeptide ENSMUSP00000122846 Ensembl | MGI Sequence Detail 171 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR006689 Small GTPase superfamily, ARF/SAR type
    IPR005225 Small GTP-binding protein domain
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 22
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory