2900060B14Rik Gene Detail

Summary

• Symbol
  2900060B14Rik
• Name
  RIKEN cDNA 2900060B14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1915454
  NCBI Gene: 68204
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:118386399-118386995 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 52.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1915454	lncRNA gene	Chr1:118386382-118387152 (-)
129S1/SvImJ	ENSMUSG00200001791	lncRNA gene	Chr1:115859310-115859925 (-)
A/J	ENSMUSG00195004664	lncRNA gene	Chr1:115101685-115102300 (-)
AKR/J	ENSMUSG00220025129	lncRNA gene	Chr1:114917073-114917688 (-)
BALB/cJ	ENSMUSG00180012789	lncRNA gene	Chr1:115508984-115509599 (-)
C3H/HeJ	ENSMUSG00175019552	lncRNA gene	Chr1:115332721-115333336 (-)
C57BL/6NJ	ENSMUSG00215013318	lncRNA gene	Chr1:115292911-115293526 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002384	antisense lncRNA gene	Chr1:110506053-110506622 (-)
CAST/EiJ	ENSTCUG00005006511	lncRNA gene	Chr1:114243186-114243801 (-)
CBA/J	ENSMUSG00210001329	lncRNA gene	Chr1:115162357-115162972 (-)
DBA/2J	ENSMUSG00185013659	lncRNA gene	Chr1:119610195-119610810 (-)
FVB/NJ	ENSMUSG00205012348	lncRNA gene	Chr1:114659681-114660296 (-)
JF1/MsJ	ENSUMUG00000030468	lncRNA gene	Chr1:118705063-118705678 (-)
LP/J	ENSMUSG00230009042	lncRNA gene	Chr1:119037248-119037865 (-)
NOD/ShiLtJ	ENSMUSG00190006576	lncRNA gene	Chr1:115140471-115141086 (-)
NZO/HlLtJ	ENSMUSG00225002757	lncRNA gene	Chr1:122829303-122829918 (-)
PWK/PhJ	ENSLUMG00010014740	lncRNA gene	Chr1:114296196-114296811 (-)
SPRET/EiJ	ENSMSPG00010016803	lncRNA gene	Chr1:116929225-116929817 (-)
WSB/EiJ	ENSIUOG00005003012	lncRNA gene	Chr1:115007668-115008286 (-)

Homology

• Gene Tree
  2900060B14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving 2900060B14Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  7

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000107722 (Evidence)
• NCBI Gene
  68204

Representative Sequences			Length	Strain/Species
genomic	68204	NCBI Gene Model | MGI Sequence Detail	597	C57BL/6J
transcript	NR_027901	RefSeq | MGI Sequence Detail	597	C57BL/6
polypeptide	Q3TE51	UniProt | EBI | MGI Sequence Detail	26	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 7

  cDNA 7

  
  

  Microarray probesets 1

References

• Summaries
  All 15

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563