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A930003A15Rik Gene Detail
Summary
  • Symbol
    A930003A15Rik
  • Name
    RIKEN cDNA A930003A15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915412
    NCBI Gene: 68162
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:19876567-19884274 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 12.31 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915412
 lncRNA gene Chr16:19876567-19884274 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022634
 protein coding gene Chr16:17153588-17163676 (-)
A/J MGP_AJ_G0022596
 protein coding gene Chr16:16348515-16358951 (-)
AKR/J MGP_AKRJ_G0022571
 protein coding gene Chr16:16995300-17004017 (-)
BALB/cJ MGP_BALBcJ_G0022600
 protein coding gene Chr16:16498281-16505052 (-)
C3H/HeJ MGP_C3HHeJ_G0022365
 protein coding gene Chr16:17145348-17152719 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023051
 protein coding gene Chr16:17498645-17506082 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020568
 protein coding gene Chr16:17062025-17067725 (-)
CAST/EiJ MGP_CASTEiJ_G0021895
 protein coding gene Chr16:17125648-17131781 (-)
CBA/J MGP_CBAJ_G0022337
 protein coding gene Chr16:18213553-18223210 (-)
DBA/2J MGP_DBA2J_G0022469
 protein coding gene Chr16:16250831-16258404 (-)
FVB/NJ MGP_FVBNJ_G0022444
 protein coding gene Chr16:16313345-16320100 (-)
LP/J MGP_LPJ_G0022536
 protein coding gene Chr16:16917850-16925209 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022464
 protein coding gene Chr16:17911716-17919022 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023062
 protein coding gene Chr16:16928822-16935997 (-)
PWK/PhJ MGP_PWKPhJ_G0021636
 protein coding gene Chr16:16522159-16530544 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021465
 protein coding gene Chr16:16735492-16743775 (-)
WSB/EiJ MGP_WSBEiJ_G0021939
 protein coding gene Chr16:16932246-16940125 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    9
  • Tissues
    4
  • cDNA Data
    8
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
    34
  • RefSeq
    2
  • UniProt
    2
  • UniGene
    35159
Representative SequencesLengthStrain/SpeciesFlank
genomic 68162 NCBI Gene Model | MGI Sequence Detail 7708 C57BL/6J ±  kb
transcript NR_015488 RefSeq | MGI Sequence Detail 1140 C57BL/6  
polypeptide Q3U552 UniProt | EBI | MGI Sequence Detail 87 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
Other
Accession IDs
less
MGI:2146510
References
more
  • Summaries
    All 18
    Developmental Gene Expression 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/10/2019
MGI 6.14 		The Jackson Laboratory