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Stx19
Gene Detail
Symbol

Name
ID
Stx19
syntaxin 19
MGI:1915409
Synonyms
A030009B12Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 16
36.43 cM, cytoband C1.2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr16:62814676-62824346 bp, + strand
From VEGA annotation of GRCm38

  9671 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:55777  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Protein SuperFamily: syntaxin
Gene Tree: Stx19

Human
homologs
Human Homolog STX19, syntaxin 19
NCBI Gene ID 415117
neXtProt AC  NX_Q8N4C7
Human Chr (Location)  3q11; chr3:94014234-94028616 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Stx19 interacts with 226 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process intracellular protein transport, vesicle-mediated transport
Component integral component of membrane, membrane
Function SNAP receptor activity
External Resources: FuncBase
Expression
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000024089 (Evidence)
Ensembl Gene ModelENSMUSG00000047854 (Evidence)
Entrez Gene68159 (Evidence)
UniGene386793
DFCITC1587323, TC1631092
DoTSDT.91335539
NIA Mouse Gene IndexU017244
Consensus CDS ProjectCCDS28262.1
International Mouse Knockout Project StatusStx19
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024089 VEGA Gene Model | MGI Sequence Detail 9671 C57BL/6J ±  kb
transcript OTTMUST00000058919 VEGA | MGI Sequence Detail 2812 Not Applicable 
polypeptide OTTMUSP00000028613 VEGA | MGI Sequence Detail 292 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(54 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR015708 Syntaxin-3
InterPro IPR006012 Syntaxin/epimorphin, conserved site
InterPro IPR006011 Syntaxin, N-terminal
InterPro IPR000727 Target SNARE coiled-coil domain
InterPro IPR010989 t-SNARE
Protein Ontology PR:000015791 syntaxin-19
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(25)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory