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Tox4
Gene Detail
 Symbol
Name
ID
Tox4
TOX high mobility group box family member 4
MGI:1915389
Synonyms 5730589K01Rik
Feature Type protein coding gene
Genetic Map
Chromosome 14
26.88 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:52279146-52296391 bp, + strand
From VEGA annotation of GRCm38

  17246 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8889  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Tox4

Human
homologs
Human Homolog TOX4, TOX high mobility group box family member 4
NCBI Gene ID 9878
neXtProt AC  NX_O94842
Human Synonyms  C14orf92, KIAA0737, LCP1, MIG7
Human Chr (Location)  14q11.2; chr14:21477176-21499175 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(24) : Gene trapped(22) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tox4 interacts with 324 markers (Mir7-1, Mir10a, Mir10b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component chromatin, nucleus, ...
Function DNA binding
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (81)    Tissues (59)    Images (20)
Theiler Stages: 2, 3, 4, 5, 17, 18, 21, 23, 28
Assay TypeResults
RNA in situ 73
RT-PCR 8
cDNA source data(19)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(20) cDNA(19) Primer pair(1)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000017450 (Evidence)
Ensembl Gene ModelENSMUSG00000016831 (Evidence)
Entrez Gene268741 (Evidence)
Consensus CDS ProjectCCDS36920.1
International Mouse Knockout Project StatusTox4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017450 VEGA Gene Model | MGI Sequence Detail 17246 C57BL/6J ±  kb
transcript OTTMUST00000042357 VEGA | MGI Sequence Detail 5340 Not Applicable 
polypeptide OTTMUSP00000019037 VEGA | MGI Sequence Detail 619 Not Applicable 

For the selected sequences
All sequences(48) RefSeq(2) UniProt(5)
Polymorphisms SNPs within 2kb(151 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR009071 High mobility group (HMG) box domain
Protein Ontology PR:000031899 TOX high mobility group box family member 4
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
All references(36)
Other
accession IDs
MGI:2138093

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory