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Sdccag3 Gene Detail
Summary
  • Symbol
    Sdccag3
  • Name
    serologically defined colon cancer antigen 3
  • Synonyms
    C330016H24Rik, C630038K21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915362
    NCBI Gene: 68112
Location & Maps
more
  • Sequence Map
    Chr2:26382802-26389316 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      6515 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 18.88 cM, cytoband A3
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SDCCAG3, serologically defined colon cancer antigen 3
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SDCCAG3, serologically defined colon cancer antigen 3
    Orthology source: HomoloGene
  • Synonyms
    NY-CO-3
  • Links
    NCBI Gene ID: 10807
    neXtProt AC: NX_Q96C92

  • Chr Location
    9q34.3; chr9:136401922-136410602 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    6
  • Gene trapped
    2
  • Targeted
    4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000012776 VEGA Gene Model | MGI Sequence Detail 6515 C57BL/6J ±  kb
transcript OTTMUST00000030580 VEGA | MGI Sequence Detail 2193 Not Applicable  
polypeptide OTTMUSP00000013731 VEGA | MGI Sequence Detail 432 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    11 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000014558 serologically defined colon cancer antigen 3
  • InterPro Domains
    IPR026757 Serologically defined colon cancer antigen 3
Molecular
Reagents
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  • All nucleic 9
    cDNA 9

    Microarray probesets 3
Other
Accession IDs
less
MGI:1925957
References
more
  • Summaries
    All 27
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory