A030009H04Rik
Gene Detail

Symbol Name ID

A030009H04Rik RIKEN cDNA A030009H04 gene MGI:1915359

Synonyms

2310043C11Rik

Feature Type

lincRNA gene

Genetic Map

Chromosome 11

42.52 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr11:69340461-69342641 bp, + strand From VEGA annotation of GRCm38   2181 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

Gene Tree: A030009H04Rik

Alleles and phenotypes

All alleles(1) : Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	metal ion binding

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (91)    Tissues (8)    Images (24)
Theiler Stages: 23

Assay Type	Results
RNA in situ	91

cDNA source data(23)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(24) cDNA(24)
Microarray probesets(7)

Other database links

VEGA Gene Model	OTTMUSG00000005968 (Evidence)
Ensembl Gene Model	ENSMUSG00000043419 (Evidence)
Entrez Gene	80515 (Evidence)
UniGene	5324
DFCI	TC1581038
DoTS	DT.487903, DT.94175226
NIA Mouse Gene Index	U012818
International Mouse Knockout Project Status	A030009H04Rik

Sequences

Length	Strain/Species
genomic	OTTMUSG00000005968	VEGA Gene Model | MGI Sequence Detail	2181	C57BL/6J
transcript	OTTMUST00000013327	VEGA | MGI Sequence Detail	2081	Not Applicable
polypeptide	Q9DCB3	UniProt | EBI | MGI Sequence Detail	74	Not Applicable

All sequences(27) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(6 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR013083	Zinc finger, RING/FYVE/PHD-type
InterPro	IPR001841	Zinc finger, RING-type
InterPro	IPR017907	Zinc finger, RING-type, conserved site

Graphical View of Protein Domain Structure

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)

Other accession IDs

MGI:1926026, MGI:1930863, MGI:2142431