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Chd3os
Gene Detail
 Symbol
Name
ID
Chd3os
chromodomain helicase DNA binding protein 3, opposite strand
MGI:1915359
Synonyms 2310043C11Rik, A030009H04Rik
Feature Type unclassified non-coding RNA gene
Genetic Map
Chromosome 11
42.52 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:69340461-69342641 bp, + strand
From VEGA annotation of GRCm38

  2181 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Chd3os
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Gene trapped(1)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function metal ion binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (91)    Tissues (8)    Images (24)
Theiler Stages: 23
Assay TypeResults
RNA in situ 91
cDNA source data(23)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(24) cDNA(24)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000005968 (Evidence)
Ensembl Gene ModelENSMUSG00000043419 (Evidence)
Entrez Gene80515 (Evidence)
UniGene5324
DFCITC1581038
DoTSDT.487903, DT.94175226
NIA Mouse Gene IndexU012818
International Mouse Knockout Project StatusChd3os
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005968 VEGA Gene Model | MGI Sequence Detail 2181 C57BL/6J ±  kb
transcript OTTMUST00000013327 VEGA | MGI Sequence Detail 2081 Not Applicable 
polypeptide Q9DCB3 UniProt | EBI | MGI Sequence Detail 74 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(19 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
InterPro IPR001841 Zinc finger, RING-type
InterPro IPR017907 Zinc finger, RING-type, conserved site
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(29)
Other
accession IDs
MGI:1926026, MGI:1930863, MGI:2142431

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory