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Rnf227 Gene Detail
Summary
  • Symbol
    Rnf227
  • Name
    ring finger protein 227
  • Synonyms
    2310043C11Rik, A030009H04Rik, Chd3os
Location &
Maps
more
  • Sequence Map
    Chr11:69340769-69342647 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 42.52 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915359
protein coding gene Chr11:69340461-69342647 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015181
unclassified non-coding RNA gene Chr11:69763084-69766568 (+)
A/J MGP_AJ_G0015155
unclassified non-coding RNA gene Chr11:67139141-67141322 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0015117
unclassified non-coding RNA gene Chr11:67457901-67460081 (+)
C3H/HeJ MGP_C3HHeJ_G0014941
unclassified non-coding RNA gene Chr11:69162739-69164919 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015574
unclassified non-coding RNA gene Chr11:71879321-71881501 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013317
unclassified non-coding RNA gene Chr11:64069126-64071323 (+)
CAST/EiJ MGP_CASTEiJ_G0014494
unclassified non-coding RNA gene Chr11:69403466-69405643 (+)
CBA/J MGP_CBAJ_G0014920
unclassified non-coding RNA gene Chr11:75093192-75095372 (+)
DBA/2J MGP_DBA2J_G0015013
unclassified non-coding RNA gene Chr11:66733213-66735395 (+)
FVB/NJ MGP_FVBNJ_G0015025
unclassified non-coding RNA gene Chr11:66357436-66359617 (+)
LP/J MGP_LPJ_G0015094
unclassified non-coding RNA gene Chr11:70334598-70338419 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015051
unclassified non-coding RNA gene Chr11:75710371-75712696 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015613
unclassified non-coding RNA gene Chr11:69397374-69399555 (+)
PWK/PhJ MGP_PWKPhJ_G0014286
unclassified non-coding RNA gene Chr11:67372698-67374879 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014073
unclassified non-coding RNA gene Chr11:69219793-69221972 (+)
WSB/EiJ MGP_WSBEiJ_G0014597
unclassified non-coding RNA gene Chr11:69074917-69079506 (+)



Homology
more
  • Human Ortholog
    RNF227, ring finger protein 227
  • Human Ortholog
    RNF227, ring finger protein 227
    Orthology source: HGNC
  • Synonyms
    LINC02581
  • Links
    NCBI Gene ID: 284023
    UniProt: A6NIN4

  • Chr Location
    17p13.1; chr17:7913322-7915947 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 80515 NCBI Gene Model | MGI Sequence Detail 1879 C57BL/6J ±  kb
transcript NR_027827 RefSeq | MGI Sequence Detail 1779 C57BL/6  
polypeptide Q9DCB3 UniProt | EBI | MGI Sequence Detail 190 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR027952 Domain of unknown function DUF4632
    IPR013083 Zinc finger, RING/FYVE/PHD-type
    IPR001841 Zinc finger, RING-type
    IPR017907 Zinc finger, RING-type, conserved site
Molecular
Reagents
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  • All nucleic 25
    cDNA 25

    Microarray probesets 7
Other
Accession IDs
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MGI:1926026, MGI:1930863, MGI:2142431
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory