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Pdcd2l Gene Detail
Summary
  • Symbol
    Pdcd2l
  • Name
    programmed cell death 2-like
  • Synonyms
    6030457N17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915329
    NCBI Gene: 68079
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:34184499-34196661 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 19.45 cM, cytoband B1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    164 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915329
protein coding gene Chr7:34184497-34196693 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032073
protein coding gene Chr7:33441777-33454381 (-)
A/J MGP_AJ_G0032052
protein coding gene Chr7:32617491-32631001 (-)
AKR/J MGP_AKRJ_G0031986
protein coding gene Chr7:33395065-33407239 (-)
BALB/cJ MGP_BALBcJ_G0032060
protein coding gene Chr7:32901433-32921630 (-)
C3H/HeJ MGP_C3HHeJ_G0031777
protein coding gene Chr7:34280443-34293137 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032537
protein coding gene Chr7:35156027-35170579 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029570
protein coding gene Chr7:33357668-33370433 (-)
CAST/EiJ MGP_CASTEiJ_G0031112
protein coding gene Chr7:25398351-25410005 (-)
CBA/J MGP_CBAJ_G0031745
protein coding gene Chr7:36243573-36259251 (-)
DBA/2J MGP_DBA2J_G0031897
protein coding gene Chr7:32473795-32485232 (-)
FVB/NJ MGP_FVBNJ_G0031852
protein coding gene Chr7:32382432-32395113 (-)
LP/J MGP_LPJ_G0031974
protein coding gene Chr7:33813551-33828426 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031890
protein coding gene Chr7:35298225-35313215 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032552
protein coding gene Chr7:32914512-32928406 (-)
PWK/PhJ MGP_PWKPhJ_G0030834
protein coding gene Chr7:25783616-25796456 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030669
protein coding gene Chr7:22478939-22499051 (-)
WSB/EiJ MGP_WSBEiJ_G0031222
protein coding gene Chr7:33461070-33471720 (-)



Homology
more
  • Human Ortholog
    PDCD2L, programmed cell death 2 like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PDCD2L, programmed cell death 2 like
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 84306
    neXtProt AC: NX_Q9BRP1
    UniProt: Q9BRP1

  • Chr Location
    19q13.11; chr19:34404398-34426168 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000002635 Ensembl Gene Model | MGI Sequence Detail 12163 C57BL/6J ±  kb
transcript ENSMUST00000002710 Ensembl | MGI Sequence Detail 1295 Not Applicable  
polypeptide ENSMUSP00000002710 Ensembl | MGI Sequence Detail 364 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 53
    cDNA 53

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory