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3010026O09Rik
Gene Detail
 Symbol
Name
ID
3010026O09Rik
RIKEN cDNA 3010026O09 gene
MGI:1915317
Synonyms 2900016G09Rik
Feature Type protein coding gene
Genetic Map
Chromosome 11
30.33 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:50174444-50200115 bp, + strand
From VEGA annotation of GRCm38

  25672 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:75241  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

Gene Tree: 3010026O09Rik

Human
homologs
Human Homolog C5orf45, chromosome 5 open reading frame 45
NCBI Gene ID 51149
neXtProt AC  NX_Q6NTE8
Human Chr (Location)  5q35.3; chr5:179837266-179858840 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(13) : Gene trapped(8) Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
3010026O09Rik interacts with 20 markers (Mir20a, Mir181b-1, Mir181b-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(6)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) cDNA(6)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000005579 (Evidence)
Ensembl Gene ModelENSMUSG00000020381 (Evidence)
Entrez Gene68067 (Evidence)
NIA Mouse Gene IndexU012546
Consensus CDS ProjectCCDS48784.1
International Mouse Knockout Project Status3010026O09Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005579 VEGA Gene Model | MGI Sequence Detail 25672 C57BL/6J ±  kb
transcript OTTMUST00000012405 VEGA | MGI Sequence Detail 1142 Not Applicable 
polypeptide OTTMUSP00000005742 VEGA | MGI Sequence Detail 335 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(4) UniProt(2)
Polymorphisms SNPs within 2kb(121 from dbSNP Build 137)
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(26)
Other
accession IDs
MGI:1920109, MGI:2144309, MGI:2144532

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory