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Btf3l4 Gene Detail
Summary
  • Symbol
    Btf3l4
  • Name
    basic transcription factor 3-like 4
  • Synonyms
    4632412E09Rik, 5730434I03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915312
    NCBI Gene: 70533
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:108814295-108833614 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 50.64 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    102 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915312
protein coding gene Chr4:108814295-108834297 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028561
protein coding gene Chr4:109569580-109589907 (-)
A/J MGP_AJ_G0028524
protein coding gene Chr4:105622475-105639218 (-)
AKR/J MGP_AKRJ_G0028471
protein coding gene Chr4:108252985-108273648 (-)
BALB/cJ MGP_BALBcJ_G0028543
protein coding gene Chr4:105830040-105850183 (-)
C3H/HeJ MGP_C3HHeJ_G0028257
protein coding gene Chr4:108991823-109009574 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028983
protein coding gene Chr4:113493518-113515506 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026274
protein coding gene Chr4:100912493-100931591 (-)
CAST/EiJ MGP_CASTEiJ_G0027693
protein coding gene Chr4:106845141-106866440 (-)
CBA/J MGP_CBAJ_G0028226
protein coding gene Chr4:117228782-117250197 (-)
DBA/2J MGP_DBA2J_G0028374
protein coding gene Chr4:105253143-105270747 (-)
FVB/NJ MGP_FVBNJ_G0028342
protein coding gene Chr4:104116875-104137649 (-)
LP/J MGP_LPJ_G0028475
protein coding gene Chr4:109811251-109828597 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028368
protein coding gene Chr4:122428933-122449840 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029019
protein coding gene Chr4:108496207-108514641 (-)
PWK/PhJ MGP_PWKPhJ_G0027419
protein coding gene Chr4:103532538-103553535 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027243
protein coding gene Chr4:105851967-105877178 (-)
WSB/EiJ MGP_WSBEiJ_G0027774
protein coding gene Chr4:108669988-108690110 (-)



Homology
more
  • Human Ortholog
    BTF3L4, basic transcription factor 3 like 4
  • Vertebrate Orthologs
    11
  • Human Ortholog
    BTF3L4, basic transcription factor 3 like 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 91408
    neXtProt AC: NX_Q96K17
    UniProt: Q96K17

  • Chr Location
    1p32.3; chr1:52056185-52090716 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
  • All Mutations and Alleles
    77
  • Chemically induced (other)
    2
  • Gene trapped
    71
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Btf3l4
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028568 Ensembl Gene Model | MGI Sequence Detail 19320 C57BL/6J ±  kb
transcript ENSMUST00000102741 Ensembl | MGI Sequence Detail 1033 Not Applicable  
polypeptide ENSMUSP00000099802 Ensembl | MGI Sequence Detail 158 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 7
Other
Accession IDs
less
MGI:1917783, MGI:2140228, MGI:2140465, MGI:2140597
References
more
  • Summaries
    All 38
    Developmental Gene Expression 3
    Phenotypes 14
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory