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Tm9sf2 Gene Detail
Summary
  • Symbol
    Tm9sf2
  • Name
    transmembrane 9 superfamily member 2
  • Synonyms
    1500001N15Rik, D14Ertd64e, P76
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915309
    NCBI Gene: 68059
  • Gene Overview
    MyGene.info: TM9SF2
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:122107082-122159603 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 65.86 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    278 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915309
protein coding gene Chr14:122107038-122159604 (.)
129S1/SvImJ MGP_129S1SvImJ_G0021668
protein coding gene Chr14:119991936-120052585 (+)
A/J MGP_AJ_G0021628
protein coding gene Chr14:115336816-115390184 (+)
AKR/J MGP_AKRJ_G0021604
protein coding gene Chr14:119073631-119129570 (+)
BALB/cJ MGP_BALBcJ_G0021634
protein coding gene Chr14:115882355-115936602 (+)
C3H/HeJ MGP_C3HHeJ_G0021412
protein coding gene Chr14:118957970-119012907 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022074
protein coding gene Chr14:124600648-124656142 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019612
protein coding gene Chr14:111200883-111251896 (+)
CAST/EiJ MGP_CASTEiJ_G0020927
protein coding gene Chr14:116873241-116930830 (+)
CBA/J MGP_CBAJ_G0021380
protein coding gene Chr14:129335603-129396245 (+)
DBA/2J MGP_DBA2J_G0021503
protein coding gene Chr14:115197988-115251515 (+)
FVB/NJ MGP_FVBNJ_G0021481
protein coding gene Chr14:113552391-113604999 (+)
LP/J MGP_LPJ_G0021571
protein coding gene Chr14:120906860-120962753 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021508
protein coding gene Chr14:134334884-134390128 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022097
protein coding gene Chr14:118646388-118709727 (+)
PWK/PhJ MGP_PWKPhJ_G0020671
protein coding gene Chr14:112256017-112308202 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020509
protein coding gene Chr14:114846304-114899930 (+)
WSB/EiJ MGP_WSBEiJ_G0020983
protein coding gene Chr14:119330075-119385628 (+)



Homology
more
  • Human Ortholog
    TM9SF2, transmembrane 9 superfamily member 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TM9SF2, transmembrane 9 superfamily member 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    P76
  • Links
    NCBI Gene ID: 9375
    neXtProt AC: NX_Q99805
    UniProt: Q99805

  • Chr Location
    13q32.3; chr13:99501374-99564048 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68059 NCBI Gene Model | MGI Sequence Detail 52522 C57BL/6J ±  kb
transcript NM_080556 RefSeq | MGI Sequence Detail 3062 C57BL/6  
polypeptide P58021 UniProt | EBI | MGI Sequence Detail 662 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 183
    cDNA 182
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:1098614, MGI:2145568
References
more
  • Summaries
    All 40
    Developmental Gene Expression 3
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory