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Zfp593
Gene Detail
Symbol

Name
ID
Zfp593
zinc finger protein 593
MGI:1915290
Synonyms
3110024A21Rik, E130106C14Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 4
66.50 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:134243289-134245592 bp, - strand
From VEGA annotation of GRCm38

  2304 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41070  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 2 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: ZNF593
Gene Tree: Zfp593

Human
homologs
ZNF593, zinc finger protein 593
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 51042
neXtProt AC: NX_O00488

Human Synonyms: ZT86

Human Chr (Location): 1p36.11; chr1:26169897-26170873 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(3) Targeted(1)
Genomic Mutations involving Zfp593 (1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Zfp593 interacts with 190 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (5 records)
Data Summary: Results (54)    Tissues (43)    Images (12)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 46
RT-PCR 8
cDNA source data(53)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase znf593    NEW 
Molecular
reagents
All nucleic(58) cDNA(56) Primer pair(2)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000010564 (Evidence)
Ensembl Gene Model ENSMUSG00000028840 (Evidence)
Entrez Gene 68040 (Evidence)
UniGene 300404
DFCI TC1579957, TC1623456
Consensus CDS Project CCDS51325.1
International Mouse Phenotyping Consortium Status Zfp593
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010564 VEGA Gene Model | MGI Sequence Detail 2304 C57BL/6J ±  kb
transcript OTTMUST00000024607 VEGA | MGI Sequence Detail 1994 Not Applicable 
polypeptide OTTMUSP00000011309 VEGA | MGI Sequence Detail 134 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(61 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR022755 Zinc finger, double-stranded RNA binding
Protein Ontology PR:000018013 zinc finger protein 593
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)
Other
accession IDs
MGI:1924740, MGI:2140520

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory