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Zfp560 Gene Detail
Summary
  • Symbol
    Zfp560
  • Name
    zinc finger protein 560
  • Synonyms
    2310030G09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915280
    NCBI Gene: 434377
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:20345136-20385158 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 7.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    107 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915280
protein coding gene Chr9:20345136-20385177 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034417
protein coding gene Chr9:17460427-17513216 (-)
A/J MGP_AJ_G0034395
protein coding gene Chr9:17206887-17239718 (-)
AKR/J MGP_AKRJ_G0034322
protein coding gene Chr9:17511869-17552062 (-)
BALB/cJ MGP_BALBcJ_G0034386
protein coding gene Chr9:17115312-17142689 (-)
C3H/HeJ MGP_C3HHeJ_G0034098
protein coding gene Chr9:17819254-17858330 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034907
protein coding gene Chr9:18203112-18232003 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031837
protein coding gene Chr9:16380842-16409871 (-)
CAST/EiJ MGP_CASTEiJ_G0033421
protein coding gene Chr9:17652531-17682365 (-)
CBA/J MGP_CBAJ_G0034071
protein coding gene Chr9:18883975-18925001 (-)
DBA/2J MGP_DBA2J_G0034230
protein coding gene Chr9:17195516-17235478 (-)
FVB/NJ MGP_FVBNJ_G0034173
protein coding gene Chr9:16713669-16747748 (-)
LP/J MGP_LPJ_G0034315
protein coding gene Chr9:17650066-17687968 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034216
protein coding gene Chr9:20534195-20570948 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034927
protein coding gene Chr9:17471161-17500404 (-)
PWK/PhJ MGP_PWKPhJ_G0033127
protein coding gene Chr9:17190025-17215443 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032961
protein coding gene Chr9:17543352-17570246 (-)
WSB/EiJ MGP_WSBEiJ_G0033536
protein coding gene Chr9:17203023-17233325 (-)



Homology
more
  • Human Ortholog
    ZNF560, zinc finger protein 560
  • Vertebrate Orthologs
    5
  • Human Ortholog
    ZNF560, zinc finger protein 560
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 147741
    neXtProt AC: NX_Q96MR9
    UniProt: Q96MR9

  • Chr Location
    19p13.2; chr19:9445710-9506692 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 434377 NCBI Gene Model | MGI Sequence Detail 40023 C57BL/6J ±  kb
transcript NM_001004190 RefSeq | MGI Sequence Detail 4732 C57BL/6  
polypeptide NP_001004190 RefSeq | MGI Sequence Detail 754 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    cDNA 28

    Microarray probesets 3
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory