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Pclaf Gene Detail
Summary
  • Symbol
    Pclaf
  • Name
    PCNA clamp associated factor
  • Synonyms
    2810417H13Rik, mKIAA0101, p15(PAF)
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915276
    NCBI Gene: 68026
  • Gene Overview
    MyGene.info: PCLAF
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr9:65890237-65903266 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      13030 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 35.58 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    PCLAF, PCNA clamp associated factor
  • Vertebrate Orthologs
    8
  • Human Ortholog
    PCLAF, PCNA clamp associated factor
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KIAA0101, L5, NS5ATP9, OEATC, OEATC1, OEATC-1, p15PAF, p15/PAF, p15(PAF), PAF, PAF15
  • Links
    NCBI Gene ID: 9768
    neXtProt AC: NX_Q15004
    UniProt: Q15004

  • Chr Location
    15q22.31; chr15:64364994-64387687 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotypes from 2 alleles in 2 genetic backgrounds
    1 phenotype from multigenic genotypes
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit impaired hematopoietic stem cell function and development.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic OTTMUSG00000029849 VEGA Gene Model | MGI Sequence Detail 13030 C57BL/6J ±  kb
    transcript OTTMUST00000074077 VEGA | MGI Sequence Detail 2188 Not Applicable  
    polypeptide OTTMUSP00000038433 VEGA | MGI Sequence Detail 110 Not Applicable  
    For the selected sequence
    Polymorphisms
    less
    • SNPs within 2kb
      52 from dbSNP Build 142
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 18
      cDNA 18

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGI:2147825
    References
    more
    • Summaries
      All 43
      Developmental Gene Expression 7
      Gene Ontology 2
      Phenotypes 9
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:243411 Rutledge EA, et al., Cellular heterogeneity in the ureteric progenitor niche and distinct profiles of branching morphogenesis in organ development. Development. 2017 Sep 01;144(17):3177-3188

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    07/10/2018
    MGI 6.12
    The Jackson Laboratory