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Trabd Gene Detail
Summary
  • Symbol
    Trabd
  • Name
    TraB domain containing
  • Synonyms
    5730502D15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915226
    NCBI Gene: 67976
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:89076052-89087075 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 44.59 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915226
protein coding gene Chr15:89075124-89087077 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022215
protein coding gene Chr15:90240929-90252894 (+)
A/J MGP_AJ_G0022174
protein coding gene Chr15:86792497-86804610 (+)
AKR/J MGP_AKRJ_G0022149
protein coding gene Chr15:89363661-89375615 (+)
BALB/cJ MGP_BALBcJ_G0022180
protein coding gene Chr15:86895867-86907991 (+)
C3H/HeJ MGP_C3HHeJ_G0021950
protein coding gene Chr15:89350757-89362709 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022625
protein coding gene Chr15:93527875-93539873 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020150
protein coding gene Chr15:83020446-83032609 (+)
CAST/EiJ MGP_CASTEiJ_G0021472
protein coding gene Chr15:90129653-90141609 (+)
CBA/J MGP_CBAJ_G0021917
protein coding gene Chr15:96686177-96698122 (+)
DBA/2J MGP_DBA2J_G0022044
protein coding gene Chr15:86250494-86262447 (+)
FVB/NJ MGP_FVBNJ_G0022023
protein coding gene Chr15:85314497-85326449 (+)
LP/J MGP_LPJ_G0022115
protein coding gene Chr15:90408424-90420377 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022043
protein coding gene Chr15:101107874-101120784 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022640
protein coding gene Chr15:89398139-89410091 (+)
PWK/PhJ MGP_PWKPhJ_G0021213
protein coding gene Chr15:86294098-86306321 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021047
protein coding gene Chr15:89132641-89145049 (+)
WSB/EiJ MGP_WSBEiJ_G0021521
protein coding gene Chr15:89882698-89894640 (+)



Homology
more
  • Human Ortholog
    TRABD, TraB domain containing
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TRABD, TraB domain containing
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LP6054, PP2447
  • Links
    NCBI Gene ID: 80305
    neXtProt AC: NX_Q9H4I3
    UniProt: Q9H4I3

  • Chr Location
    22q13.33; chr22:50185889-50199599 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 36427
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TRABD
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    23 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67976 NCBI Gene Model | MGI Sequence Detail 11024 C57BL/6J ±  kb
transcript NM_001355617 RefSeq | MGI Sequence Detail 2408 C57BL/6  
polypeptide Q99JY4 UniProt | EBI | MGI Sequence Detail 376 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR002816 TraB family
Molecular
Reagents
less
  • All nucleic 129
    cDNA 129

    Microarray probesets 5
Other
Accession IDs
less
MGI:2146116
References
more
  • Summaries
    All 43
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 23
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory