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Trabd Gene Detail
Summary
  • Symbol
    Trabd
  • Name
    TraB domain containing
  • Synonyms
    5730502D15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915226
    NCBI Gene: 67976
Location & Maps
more
  • Sequence Map
    Chr15:89075124-89087077 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11954 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 44.59 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TRABD, TraB domain containing
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TRABD, TraB domain containing
    Orthology source: HGNC, HomoloGene
  • Synonyms
    LP6054, PP2447
  • Links
    NCBI Gene ID: 80305
    neXtProt AC: NX_Q9H4I3

  • Chr Location
    22q13.33; chr22:50185905-50199598 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 36427
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: TRABD
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    21 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    2
  • Targeted
    4
  • Genomic Mutations
    3 involving Trabd
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036749 VEGA Gene Model | MGI Sequence Detail 11954 C57BL/6J ±  kb
transcript OTTMUST00000094271 VEGA | MGI Sequence Detail 2439 Not Applicable  
polypeptide OTTMUSP00000052388 VEGA | MGI Sequence Detail 376 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    3 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000032820 TraB domain-containing protein
  • InterPro Domains
    IPR002816 Pheromone shutdown, TraB
Molecular
Reagents
less
  • All nucleic 128
    cDNA 128

    Microarray probesets 5
Other
Accession IDs
less
MGI:2146116
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 21
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory