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Sugt1
Gene Detail
Symbol

Name
ID
Sugt1
SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
MGI:1915205
Synonyms
2410174K12Rik, SGT1
Feature Type
protein coding gene
Genetic Map
Chromosome 14
42.72 cM, cytoband D3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr14:79587691-79629755 bp, + strand
From NCBI annotation of GRCm38

  42065 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4877  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SUGT1
Gene Tree: Sugt1

Human
homologs
SUGT1, SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 10910
neXtProt AC: NX_Q9Y2Z0

Human Synonyms: SGT1

Human Chr (Location): 13q14.3; chr13:52652696-52688298 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(63) : Gene trapped(60) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Sugt1 interacts with 155 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process positive regulation by host of symbiont catalytic activity, regulation of protein stability
Component cytoplasm, nucleus
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(196)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase sugt1 ; ZFIN sgut1    NEW 
Molecular
reagents
All nucleic(196) cDNA(196)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000022024 (Evidence)
Entrez Gene 67955 (Evidence)
UniGene 18972
DFCI TC1572778, TC1600763, TC1632846
DoTS DT.536721, DT.97376176
NIA Mouse Gene Index U015886
Consensus CDS Project CCDS36988.1
International Mouse Phenotyping Consortium Status Sugt1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 67955 NCBI Gene Model | MGI Sequence Detail 42065 C57BL/6J ±  kb
transcript NM_026474 RefSeq | MGI Sequence Detail 1951 C57BL/6 
polypeptide Q9CX34 UniProt | EBI | MGI Sequence Detail 336 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(137 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007052 CS-like domain
InterPro IPR008978 HSP20-like chaperone
InterPro IPR007699 SGS
InterPro IPR011990 Tetratricopeptide-like helical
InterPro IPR019734 Tetratricopeptide repeat
InterPro IPR013026 Tetratricopeptide repeat-containing domain
InterPro IPR013105 Tetratricopeptide TPR2
Protein Ontology PR:000015815 suppressor of G2 allele of SKP1
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory