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Zcchc3 Gene Detail
Summary
  • Symbol
    Zcchc3
  • Name
    zinc finger, CCHC domain containing 3
  • Synonyms
    2810406K24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915167
    NCBI Gene: 67917
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr2:152411955-152415027 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3073 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 74.98 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ZCCHC3, zinc finger CCHC-type containing 3
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ZCCHC3, zinc finger CCHC-type containing 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C20orf99
  • Links
    NCBI Gene ID: 85364
    neXtProt AC: NX_Q9NUD5
    UniProt: Q9NUD5

  • Chr Location
    20p13; chr20:297563-300321 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Zcchc3
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015828 VEGA Gene Model | MGI Sequence Detail 3073 C57BL/6J ±  kb
transcript OTTMUST00000037631 VEGA | MGI Sequence Detail 3073 Not Applicable  
polypeptide OTTMUSP00000016867 VEGA | MGI Sequence Detail 400 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    35 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR001878 Zinc finger, CCHC-type
    IPR036875 Zinc finger, CCHC-type superfamily
Molecular
Reagents
less
  • All nucleic 61
    cDNA 61

    Microarray probesets 5
References
more
  • Summaries
    All 23
    Developmental Gene Expression 2
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/09/2018
MGI 6.11
The Jackson Laboratory