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Coq9 Gene Detail
Summary
  • Symbol
    Coq9
  • Name
    coenzyme Q9
  • Synonyms
    2310005O14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915164
    NCBI Gene: 67914
  • Gene Overview
    MyGene.info: COQ9
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:94838417-94854895 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 46.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    253 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915164
protein coding gene Chr8:94838321-94854895 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033971
protein coding gene Chr8:96278130-96295707 (+)
A/J MGP_AJ_G0033954
protein coding gene Chr8:92526762-92543108 (+)
AKR/J MGP_AKRJ_G0033880
protein coding gene Chr8:95046103-95062186 (+)
BALB/cJ MGP_BALBcJ_G0033946
protein coding gene Chr8:92608285-92624613 (+)
C3H/HeJ MGP_C3HHeJ_G0033656
protein coding gene Chr8:95761855-95778715 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034467
protein coding gene Chr8:99782948-99805846 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031408
protein coding gene Chr8:86329137-86345944 (+)
CAST/EiJ MGP_CASTEiJ_G0032988
protein coding gene Chr8:95366465-95382820 (+)
CBA/J MGP_CBAJ_G0033632
protein coding gene Chr8:103077091-103093411 (+)
DBA/2J MGP_DBA2J_G0033786
protein coding gene Chr8:91985147-92002014 (+)
FVB/NJ MGP_FVBNJ_G0033733
protein coding gene Chr8:90955752-90971988 (+)
LP/J MGP_LPJ_G0033878
protein coding gene Chr8:96424887-96441545 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033775
protein coding gene Chr8:105370445-105387969 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034485
protein coding gene Chr8:95213058-95229374 (+)
PWK/PhJ MGP_PWKPhJ_G0032690
protein coding gene Chr8:91372887-91389746 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032527
protein coding gene Chr8:94058402-94074810 (+)
WSB/EiJ MGP_WSBEiJ_G0033100
protein coding gene Chr8:95746152-95762462 (+)



Homology
more
  • Human Ortholog
    COQ9, coenzyme Q9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    COQ9, coenzyme Q9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C16orf49, COQ10D5
  • Links
    NCBI Gene ID: 57017
    neXtProt AC: NX_O75208
    UniProt: O75208

  • Chr Location
    16q21; chr16:57447425-57461275 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 6477
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: COQ9
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with Coq9 mouse models

Human Disease Mouse Models
      
IDs
View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    22 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-in allele exhibit premature death, encephalomyopathy, hair loss, weight loss, demyelination, cardiac fibrosis and abnromal mitochondrial function.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67914 NCBI Gene Model | MGI Sequence Detail 16479 C57BL/6J ±  kb
transcript NM_026452 RefSeq | MGI Sequence Detail 1697 C57BL/6  
polypeptide Q8K1Z0 UniProt | EBI | MGI Sequence Detail 313 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 160
    cDNA 160

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142852
References
more
  • Summaries
    All 34
    Diseases 1
    Gene Ontology 7
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:252276 Barriocanal-Casado E, et al., Gene Therapy Corrects Mitochondrial Dysfunction in Hematopoietic Progenitor Cells and Fibroblasts from Coq9R239X Mice. PLoS One. 2016;11(6):e0158344

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory