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Cmc1 Gene Detail
Summary
  • Symbol
    Cmc1
  • Name
    COX assembly mitochondrial protein 1
  • Synonyms
    2010110K16Rik, 2010312P05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915149
    NCBI Gene: 67899
Location & Maps
more
  • Sequence Map
    Chr9:118064529-118150196 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      85668 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 69.87 cM, cytoband F3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CMC1, C-X9-C motif containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CMC1, C-X9-C motif containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C3orf68
  • Links
    NCBI Gene ID: 152100
    neXtProt AC: NX_Q7Z7K0

  • Chr Location
    3p24.1; chr3:28241589-28319776 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 12207
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: CMC1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039163 Ensembl Gene Model | MGI Sequence Detail 85668 C57BL/6J ±  kb
transcript ENSMUST00000044220 Ensembl | MGI Sequence Detail 1181 Not Applicable  
polypeptide ENSMUSP00000047904 Ensembl | MGI Sequence Detail 106 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    538 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000005622 COX assembly mitochondrial protein
  • InterPro Domains
    IPR013892 Cytochrome c oxidase biogenesis protein Cmc1-like
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 4
Other
Accession IDs
less
MGI:1923787, MGI:2143101
References
more
  • Summaries
    All 28
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory