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Tmem33 Gene Detail
Summary
  • Symbol
    Tmem33
  • Name
    transmembrane protein 33
  • Synonyms
    1110006G02Rik, 1600019D15Rik, 2410089A21Rik, 2700052H22Rik, 5430406L04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915128
    NCBI Gene: 67878
  • Gene Overview
    MyGene.info: TMEM33
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:67260565-67291461 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 36.00 cM, cytoband D
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    195 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915128
protein coding gene Chr5:67260565-67291461 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029593
protein coding gene Chr5:67038829-67063402 (+)
A/J MGP_AJ_G0029561
protein coding gene Chr5:64525236-64549830 (+)
AKR/J MGP_AKRJ_G0029509
protein coding gene Chr5:66592440-66618515 (+)
BALB/cJ MGP_BALBcJ_G0029570
protein coding gene Chr5:65210026-65234775 (+)
C3H/HeJ MGP_C3HHeJ_G0029293
protein coding gene Chr5:66911403-66936530 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030024
protein coding gene Chr5:69809519-69842003 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027264
protein coding gene Chr5:60578839-60601837 (+)
CAST/EiJ MGP_CASTEiJ_G0028701
protein coding gene Chr5:66087030-66118802 (+)
CBA/J MGP_CBAJ_G0029262
protein coding gene Chr5:72052921-72078153 (+)
DBA/2J MGP_DBA2J_G0029408
protein coding gene Chr5:64545401-64569730 (+)
FVB/NJ MGP_FVBNJ_G0029368
protein coding gene Chr5:63719358-63743603 (+)
LP/J MGP_LPJ_G0029493
protein coding gene Chr5:67530226-67555417 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029396
protein coding gene Chr5:74841112-74869702 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030057
protein coding gene Chr5:66261483-66287327 (+)
PWK/PhJ MGP_PWKPhJ_G0028425
protein coding gene Chr5:63582005-63607759 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028259
protein coding gene Chr5:65598992-65622150 (+)
WSB/EiJ MGP_WSBEiJ_G0028781
protein coding gene Chr5:66498768-66524357 (+)



Homology
more
  • Human Ortholog
    TMEM33, transmembrane protein 33
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TMEM33, transmembrane protein 33
    Orthology source: HomoloGene, HGNC
  • Synonyms
    1600019D15Rik, SHINC3, SHINC-3
  • Links
    NCBI Gene ID: 55161
    neXtProt AC: NX_P57088
    UniProt: P57088

  • Chr Location
    4p13; chr4:41935120-41960807 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 10018
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TMEM33
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    21 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 67878 NCBI Gene Model | MGI Sequence Detail 30897 C57BL/6J ±  kb
transcript NM_001285452 RefSeq | MGI Sequence Detail 6404 C57BL/6  
polypeptide Q9CR67 UniProt | EBI | MGI Sequence Detail 247 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 25
    cDNA 25

    Microarray probesets 12
Other
Accession IDs
less
MGI:1915829, MGI:1921744, MGI:1924069, MGI:1925743, MGI:2140828, MGI:2140867, MGI:3035502
References
more
  • Summaries
    All 50
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 21
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory