About   Help   FAQ
Slc25a11
Gene Detail
Symbol

Name
ID
Slc25a11
solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
MGI:1915113
Synonyms
2310022P18Rik, 2oxoc
Feature Type
protein coding gene
Genetic Map
Chromosome 11
43.21 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:70644196-70647479 bp, - strand
From VEGA annotation of GRCm38

  3284 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:2637  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLC25A11
Gene Tree: Slc25a11

Human
homologs
SLC25A11, solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 8402
neXtProt AC: NX_Q02978

Human Synonyms: OGC, SLC20A4

Human Chr (Location): 17p13.3; chr17:4937130-4940167 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Genomic Mutations involving Slc25a11 (1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc25a11 interacts with 86 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process transport
Component integral component of membrane, membrane, ...
Function poly(A) RNA binding, transporter activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc25a11 ; ZFIN slc25a11    NEW 
Molecular
reagents
All nucleic(12) Genomic(2) cDNA(9) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000006069 (Evidence)
Ensembl Gene Model ENSMUSG00000014606 (Evidence)
Entrez Gene 67863 (Evidence)
DFCI TC1572198, TC1656227
DoTS DT.101178613, DT.101253183, DT.535263
NIA Mouse Gene Index U033006
Consensus CDS Project CCDS24958.1
International Mouse Phenotyping Consortium Status Slc25a11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006069 VEGA Gene Model | MGI Sequence Detail 3284 C57BL/6J ±  kb
transcript OTTMUST00000013683 VEGA | MGI Sequence Detail 1711 Not Applicable 
polypeptide OTTMUSP00000006344 VEGA | MGI Sequence Detail 314 Not Applicable 

For the selected sequences
All sequences(66) RefSeq(6) UniProt(5)
Polymorphisms
SNPs within 2kb(40 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023395 Mitochondrial carrier domain
InterPro IPR018108 Mitochondrial substrate/solute carrier
Protein Ontology PR:000015006 mitochondrial 2-oxoglutarate/malate carrier protein
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/25/2015
MGI 6.0
The Jackson Laboratory