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Slc25a11
Gene Detail
Symbol

Name
ID
Slc25a11
solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
MGI:1915113
Synonyms
2310022P18Rik, 2oxoc
Feature Type
protein coding gene
Genetic Map
Chromosome 11
43.21 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:70644196-70647479 bp, - strand
From VEGA annotation of GRCm38

  3284 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:2637  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Gene Tree: Slc25a11

Human
homologs
Human Homolog SLC25A11, solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
NCBI Gene ID 8402
neXtProt AC  NX_Q02978
Human Synonyms  OGC, SLC20A4
Human Chr (Location)  17p13.3; chr17:4937130-4940167 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Gene trapped(1) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc25a11 interacts with 87 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process transport
Component integral component of membrane, membrane, ...
Function poly(A) RNA binding, transporter activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(12) Genomic(2) cDNA(9) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000006069 (Evidence)
Ensembl Gene ModelENSMUSG00000014606 (Evidence)
Entrez Gene67863 (Evidence)
DFCITC1656227, TC1572198
DoTSDT.101178613, DT.535263, DT.101253183
NIA Mouse Gene IndexU033006
Consensus CDS ProjectCCDS24958.1
International Mouse Knockout Project StatusSlc25a11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006069 VEGA Gene Model | MGI Sequence Detail 3284 C57BL/6J ±  kb
transcript OTTMUST00000013683 VEGA | MGI Sequence Detail 1711 Not Applicable 
polypeptide OTTMUSP00000006344 VEGA | MGI Sequence Detail 314 Not Applicable 

For the selected sequences
All sequences(69) RefSeq(6) UniProt(9)
Polymorphisms
SNPs within 2kb(40 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023395 Mitochondrial carrier domain
InterPro IPR018108 Mitochondrial substrate/solute carrier
Protein Ontology PR:000015006 mitochondrial 2-oxoglutarate/malate carrier protein
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory