Slc25a11
Gene Detail

Symbol

Name
ID

Slc25a11
solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
MGI:1915113

Synonyms

2310022P18Rik, 2oxoc

Feature Type

protein coding gene

Genetic Map

Chromosome 11
43.21 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr11:70644196-70647479 bp, - strand From VEGA annotation of GRCm38   3284 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:2637  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Gene Tree: Slc25a11

Human
homologs

Human Homolog		SLC25A11, solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
NCBI Gene ID		8402
neXtProt AC		NX_Q02978
Human Synonyms		OGC, SLC20A4
Human Chr (Location)		17p13.3; chr17:4937130-4940167 (-)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Genomic Mutations involving Slc25a11 (1)
Incidental mutations (data from Mutagenetix , APF )

Interactions

Slc25a11 interacts with 87 markers (Mir15a, Mir15b, Mir16-1, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (9 annotations)

Process	transport
Component	integral component of membrane, membrane, ...
Function	poly(A) RNA binding, transporter activity

External Resources: FuncBase

Expression

Literature Summary: (1 records)

Data Summary: Results (1)    Tissues (1)    Images (1)    Tissue x Stage Matrix (view)

Assay Type	Results
RNA in situ	1

cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(12) Genomic(2) cDNA(9) Primer pair(1)
Microarray probesets(3)

Other database
links

VEGA Gene Model	OTTMUSG00000006069 (Evidence)
Ensembl Gene Model	ENSMUSG00000014606 (Evidence)
Entrez Gene	67863 (Evidence)
DFCI	TC1572198, TC1656227
DoTS	DT.535263, DT.101253183, DT.101178613
NIA Mouse Gene Index	U033006
Consensus CDS Project	CCDS24958.1
International Mouse Knockout Project Status	Slc25a11

Sequences

Length	Strain/Species
genomic	OTTMUSG00000006069	VEGA Gene Model | MGI Sequence Detail	3284	C57BL/6J
transcript	OTTMUST00000013683	VEGA | MGI Sequence Detail	1711	Not Applicable
polypeptide	OTTMUSP00000006344	VEGA | MGI Sequence Detail	314	Not Applicable

All sequences(69) RefSeq(6) UniProt(9)

Polymorphisms

SNPs within 2kb(40 from dbSNP Build 137)

Protein-related
information

Resource	ID	Description
InterPro	IPR023395	Mitochondrial carrier domain
InterPro	IPR018108	Mitochondrial substrate/solute carrier
Protein Ontology	PR:000015006	mitochondrial 2-oxoglutarate/malate carrier protein

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(32)