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Cdca5
Gene Detail
Symbol

Name
ID
Cdca5
cell division cycle associated 5
MGI:1915099
Synonyms
2610036L13Rik, sororin p35
Feature Type
protein coding gene
Genetic Map
Chromosome 19
4.34 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:6084983-6091777 bp, + strand
From VEGA annotation of GRCm38

  6795 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49860  Vertebrate Homology Class
1 human; 1 mouse; 3 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 western clawed frog

HCOP human homology predictions: CDCA5
Gene Tree: Cdca5

Human
homologs
CDCA5, cell division cycle associated 5
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 113130
neXtProt AC: NX_Q96FF9

Human Synonyms: SORORIN

Human Chr (Location): 11q12.1; chr11:65061009-65084150 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(18) : Gene trapped(16) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cdca5 interacts with 121 markers (Mir7-2, Mir7b, Mir9-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (24 annotations)
Process cell cycle, cell division, ...
Component chromatin, chromosome, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (95)    Tissues (94)    Images (11)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 95
cDNA source data(79)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase cdca5    NEW 
Molecular
reagents
All nucleic(79) cDNA(79)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000017313 (Evidence)
Ensembl Gene Model ENSMUSG00000024791 (Evidence)
Entrez Gene 67849 (Evidence)
UniGene 23526
DFCI TC1576260
DoTS DT.530394, DT.101387755
NIA Mouse Gene Index U043891
Consensus CDS Project CCDS29493.1
International Mouse Phenotyping Consortium Status Cdca5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017313 VEGA Gene Model | MGI Sequence Detail 6795 C57BL/6J ±  kb
transcript OTTMUST00000042057 VEGA | MGI Sequence Detail 2024 Not Applicable 
polypeptide OTTMUSP00000018914 VEGA | MGI Sequence Detail 264 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(22 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018605 Sororin protein
Protein Ontology PR:000005223 sororin
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:204095 Remeseiro S, et al., Reduction of Nipbl impairs cohesin loading locally and affects transcription but not cohesion-dependent functions in a mouse model of Cornelia de Lange Syndrome. Biochim Biophys Acta. 2013 Dec;1832(12):2097-102
All references(36)
Other
accession IDs
MGI:2147629, MGI:2147737, MGI:2147801

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory