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Rnf115 Gene Detail
Summary
  • Symbol
    Rnf115
  • Name
    ring finger protein 115
  • Synonyms
    2610028E05Rik, Rabring7, Zfp364
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915095
    NCBI Gene: 67845
  • Gene Overview
    MyGene.info: RNF115
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:96727585-96791155 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 41.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    159 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915095
protein coding gene Chr3:96727585-96791638 (.)
129S1/SvImJ MGP_129S1SvImJ_G0027632
protein coding gene Chr3:97620591-97693668 (+)
A/J MGP_AJ_G0027594
protein coding gene Chr3:94498879-94564842 (+)
AKR/J MGP_AKRJ_G0027561
protein coding gene Chr3:96733300-96808273 (+)
BALB/cJ MGP_BALBcJ_G0027604
protein coding gene Chr3:94308453-94377628 (+)
C3H/HeJ MGP_C3HHeJ_G0027336
protein coding gene Chr3:97033334-97097499 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028050
protein coding gene Chr3:101179402-101255194 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025391
protein coding gene Chr3:90772744-90841408 (+)
CAST/EiJ MGP_CASTEiJ_G0026791
protein coding gene Chr3:96289886-96364163 (+)
CBA/J MGP_CBAJ_G0027311
protein coding gene Chr3:104887537-104965878 (+)
DBA/2J MGP_DBA2J_G0027454
protein coding gene Chr3:93826887-93892091 (+)
FVB/NJ MGP_FVBNJ_G0027423
protein coding gene Chr3:91837416-91903576 (+)
LP/J MGP_LPJ_G0027559
protein coding gene Chr3:98902684-98972199 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027449
protein coding gene Chr3:110970638-111044469 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028104
protein coding gene Chr3:96342993-96413109 (+)
PWK/PhJ MGP_PWKPhJ_G0026516
protein coding gene Chr3:93661526-93728910 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026338
protein coding gene Chr3:94640482-94713688 (+)
WSB/EiJ MGP_WSBEiJ_G0026869
protein coding gene Chr3:96793134-96863324 (+)



Homology
more
  • Human Ortholog
    RNF115, ring finger protein 115
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RNF115, ring finger protein 115
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BCA2, ZNF364
  • Links
    NCBI Gene ID: 27246
    neXtProt AC: NX_Q9Y4L5
    UniProt: Q9Y4L5

  • Chr Location
    1q21.1; chr1:145742189-145824123 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67845 NCBI Gene Model | MGI Sequence Detail 63571 C57BL/6J ±  kb
transcript NM_026406 RefSeq | MGI Sequence Detail 2265 Not Specified  
polypeptide Q9D0C1 UniProt | EBI | MGI Sequence Detail 305 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 82
    cDNA 82

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139912
References
more
  • Summaries
    All 39
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 7
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:213100 Smith CJ, et al., The E3 ubiquitin ligases RNF126 and Rabring7 regulate endosomal sorting of the epidermal growth factor receptor. J Cell Sci. 2013 Mar 15;126(Pt 6):1366-80

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory