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Lockd Gene Detail
Summary
  • Symbol
    Lockd
  • Name
    lncRNA downstream of Cdkn1b
  • Synonyms
    1190002F15Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915081
    NCBI Gene: 381822
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:134929092-134951718 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    191 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915081
lncRNA gene Chr6:134929092-134956798 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007080
lincRNA gene Chr6:139233159-139263026 (+)
A/J MGP_AJ_G0007077
lincRNA gene Chr6:133765365-133791935 (+)
AKR/J MGP_AKRJ_G0007045
lincRNA gene Chr6:137823182-137852783 (+)
BALB/cJ MGP_BALBcJ_G0007052
lincRNA gene Chr6:133579146-133605952 (+)
C3H/HeJ MGP_C3HHeJ_G0006997
lincRNA gene Chr6:137868198-137895422 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007217
lincRNA gene Chr6:143010205-143046293 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006443
lincRNA gene Chr6:132908067-132936457 (+)
CAST/EiJ MGP_CASTEiJ_G0006904
lincRNA gene Chr6:137285323-137314878 (+)
CBA/J MGP_CBAJ_G0006977
lincRNA gene Chr6:148352561-148381956 (+)
DBA/2J MGP_DBA2J_G0006999
lincRNA gene Chr6:132615775-132643514 (+)
FVB/NJ MGP_FVBNJ_G0007022
lincRNA gene Chr6:131528782-131555626 (+)
LP/J MGP_LPJ_G0007083
lincRNA gene Chr6:139336416-139366505 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007002
lincRNA gene Chr6:152386738-152427055 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007224
lincRNA gene Chr6:137561959-137592181 (+)
PWK/PhJ MGP_PWKPhJ_G0006848
lincRNA gene Chr6:131106804-131134969 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006758
lincRNA gene Chr6:135740123-135773690 (+)
WSB/EiJ MGP_WSBEiJ_G0006964
lincRNA gene Chr6:138193817-138227338 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 381822 NCBI Gene Model | MGI Sequence Detail 22627 C57BL/6J ±  kb
transcript NR_037956 RefSeq | MGI Sequence Detail 607 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 4
Other
Accession IDs
less
MGI:2141379
References
more
  • Summaries
    All 18
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:248786 Paralkar VR, et al., Unlinking an lncRNA from Its Associated cis Element. Mol Cell. 2016 Apr 7;62(1):104-10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory