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1110051M20Rik Gene Detail
Summary
  • Symbol
    1110051M20Rik
  • Name
    RIKEN cDNA 1110051M20 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915079
    NCBI Gene: 228356
  • Gene Overview
    MyGene.info: C11orf49
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:91275068-91444704 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 50.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    476 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915079
protein coding gene Chr2:91273240-91444714 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026149
protein coding gene Chr2:92595914-92785376 (-)
A/J MGP_AJ_G0026110
protein coding gene Chr2:88887048-89057830 (-)
AKR/J MGP_AKRJ_G0026091
protein coding gene Chr2:91342365-91524260 (-)
BALB/cJ MGP_BALBcJ_G0026119
protein coding gene Chr2:89068057-89244530 (-)
C3H/HeJ MGP_C3HHeJ_G0025870
protein coding gene Chr2:91621888-91806051 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026570
protein coding gene Chr2:95854756-96036145 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023960
protein coding gene Chr2:85394524-85561461 (-)
CAST/EiJ MGP_CASTEiJ_G0025335
protein coding gene Chr2:92160230-92350932 (-)
CBA/J MGP_CBAJ_G0025848
protein coding gene Chr2:99113712-99331988 (-)
DBA/2J MGP_DBA2J_G0025984
protein coding gene Chr2:88489375-88659364 (-)
FVB/NJ MGP_FVBNJ_G0025947
protein coding gene Chr2:87595439-87766655 (-)
LP/J MGP_LPJ_G0026088
protein coding gene Chr2:92804220-92989829 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025973
protein coding gene Chr2:102146983-102348809 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026624
protein coding gene Chr2:91413853-91597669 (-)
PWK/PhJ MGP_PWKPhJ_G0025070
protein coding gene Chr2:88217414-88392659 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024871
protein coding gene Chr2:90980451-91168739 (-)
WSB/EiJ MGP_WSBEiJ_G0025402
protein coding gene Chr2:92011822-92203838 (-)



Homology
more
  • Human Ortholog
    C11orf49, chromosome 11 open reading frame 49
  • Vertebrate Orthologs
    9
  • Human Ortholog
    C11orf49, chromosome 11 open reading frame 49
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 79096
    neXtProt AC: NX_Q9H6J7
    UniProt: Q9H6J7

  • Chr Location
    11p11.2; chr11:46936524-47164381 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040591 Ensembl Gene Model | MGI Sequence Detail 169637 C57BL/6J ±  kb
transcript ENSMUST00000102594 Ensembl | MGI Sequence Detail 1977 Not Applicable  
polypeptide ENSMUSP00000099654 Ensembl | MGI Sequence Detail 331 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR038968 UPF0705 protein C11orf49
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 6
Other
Accession IDs
less
MGI:2139007
References
more
  • Summaries
    All 29
    Phenotypes 12
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory